Pseudomyrmex gracilis (graceful twig ant): 109853880
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Entry
109853880 CDS
T05003
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04140
Autophagy - animal
pgc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109853880
04148 Efferocytosis
109853880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109853880
Membrane trafficking [BR:
pgc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109853880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_CDC20-Fz
Clathrin
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_HPS5
TPR_7
Beta-prop_EML_2
WDR55
TPR_PEP5_VPS11
Beta-prop_CAF1B_HIR1
zf_RING_Vps8_fungal
zf-RING_Vps41
Beta-prop_RIG_2nd
zf-RING_5
Beta-prop_WDR90_POC16_2nd
Vps39_1
WD40_MABP1-WDR62_2nd
zf-RING_2
ANAPC4_WD40
TPR_2
TPR_12
zf_RING_Vps8
Beta-prop_WDR19_1st
PEP5_VPS11_N
EIF3I
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
109853880
NCBI-ProteinID:
XP_020282009
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MESVSNKDEQNNQEDSDSSEIDEIEPRLKYVRIRNDLEHILQNDAASCIAVHPKFLCLGS
HWGMIHLLDHQGNNVKSKTLQAHTVAVNQISIDQNGDFIASCSDDGKVFIYGLYSTENNH
NMSMGRLVKSIAIDPNYYKNGSGRRFITGDDKLVLYEKTFLARMKPTILCEAEGGVRSVA
WCGRFVAWASDTGVRVYDLDAKCSLGLIKWSRTADASPEHYRCNLQWSNDKTLLIGWVDI
VRVCHIRKRTMQEMINRDLPEFVVDPVSTFQVDFYISGIGPLGNQLVLLGCLKEPDEDGK
NQRPTLHVVEPKYQDFSVVCANSLTLRGYKEYSCNDYHLDCLKEENRFFIVSPKDIVVAS
LYDTDDRIEWLLNHGKFEQALEAVTTNNGKDCKRHTVLDVGRIYLDHLLACEKYDEAGKL
CLKVLGRNKKLWEEEVYKFARVHQLRSISSYLPRGDVTLDPLIYEMVLYEYLKMDPDGFL
QLVKEWSPSLYTVAAVVNGVLEHLLVHSQRQNVLLEALAILYIHDGKYDKALAMYLKLRH
KDVFQLIQKYQLYNSVYDMIEGLMDLDTERAIEFFLEKDRVPSDVVVQKLQHNHRYLYLY
LDALDKKDMKDSKGKYHGLLVRLYADYSRDKLLPLLRRSDNYPIQQALDICSQRRFYPEM
VYLLGRIGNTSEALALMTRELNDMESAIAFCQEHDDEELWNDLINYSLDKPKAITFLLQK
IGTYVDPRLMVQKIDPTLVIIGLKKALVKMMCDYNLQVSVQEGCKKILSNDYFNLHERLV
RCHQKGIFVDDDQMCGACHRKIIVREPRNMVVFYCKHCFHEDCLSDFELVENCVICNSQK
QITHGRK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgtatctaacaaagacgaacaaaacaatcaagaggattccgattcttcagaa
atagatgaaatagagcccagattgaaatatgtcagaatacgcaatgatctggaacatatt
cttcagaatgatgcagctagttgtatcgctgtacatccaaagttcctctgtctgggatca
cactggggaatgattcatcttttggatcatcaaggaaacaatgtgaaatctaaaacactg
caagcacacacagtggcggtaaatcagatttccatagaccaaaatggagactttattgct
tcttgcagtgatgatggaaaagtttttatttatggattatacagcacagagaataatcat
aacatgagcatgggtagactagtcaagagtatagcaattgatccgaattattataagaac
ggcagcggcagaaggtttatcacaggcgatgacaaactcgtgctttatgagaaaactttt
ctggccagaatgaagccaacgatactttgtgaagccgaaggtggtgttagatctgttgca
tggtgcggtcgttttgtggcatgggcatccgatacaggcgtgagagtttatgatcttgac
gccaagtgttcattaggactcattaaatggtcccgtacagcagacgcatcgccagagcac
tacaggtgcaatttgcagtggtcgaatgataagacattgctgatcggatgggtggacatt
gtgcgcgtttgtcacatcaggaaacgcaccatgcaagagatgatcaatcgggatttacct
gaatttgtagtggatccagtgtcaacgttccaagtagatttttatatatccggtatagga
ccgctaggaaatcagctggtattgctgggttgtttaaaggaaccggacgaagatggaaag
aatcaacgtccaaccttgcacgtggttgaaccaaagtatcaagatttctcagtggtgtgt
gcgaattcgcttactctacgcggctacaaagaatacagctgcaacgattatcacttagat
tgtttgaaggaagaaaataggttttttatcgtaagtccgaaagacatcgtagtagctagt
ttgtatgacacagacgatagaatagagtggttgttgaatcatggcaagttcgagcaagcc
ttagaagcggtaacgacgaacaacggcaaggattgtaagaggcacactgtattagacgtc
gggcgtatttatctggatcatttattggcgtgcgaaaagtacgacgaggctggaaaactg
tgcctcaaagttttaggacggaacaaaaaattgtgggaagaagaggtttataaattcgcc
agggtacatcagctgcgctcaatctcgtcctacttgcctcgaggtgatgtcactctcgat
ccgctcatctacgagatggttttgtatgaatatctgaagatggatcccgacggtttcctg
caactagtcaaagagtggtccccgagtttatatacggtcgcggccgttgtcaatggcgta
ctggaacatctattggtccacagtcaacggcaaaatgtattattggaagccttagctatt
ttatacattcacgacggcaagtacgataaagcgctcgccatgtacttgaagctgcggcac
aaagatgtcttccaattaatccagaagtaccagttgtacaattcggtgtacgacatgatc
gagggtctgatggatctcgacacggagcgtgccatagagttttttctggaaaaggacaga
gtgccgtctgatgttgttgtacaaaagctgcagcataatcatcgttatttatatttgtat
ttagatgccttagacaagaaggacatgaaggactcgaaaggcaaatatcacgggttgctg
gtgcgattgtacgccgattattcgagagataagttactgcctcttctacgccgctcggat
aattatccgatacaacaagctttggatatatgtagtcaacgcagattttatccggaaatg
gtgtacttgctaggcagaattggaaatacgtcagaggctctggcgcttatgacgagagaa
ctcaacgatatggagagcgcgatcgcattttgtcaagaacatgacgatgaggaattgtgg
aacgatctaatcaattattcacttgataagcccaaggctatcacatttcttctccaaaag
atcggcacttacgtcgatccccggctcatggtacaaaagatagaccctaccttggtgatc
ataggattaaagaaagcgttggtcaagatgatgtgcgactacaatctgcaagtgtccgtg
caggaaggttgcaaaaaaatactatccaacgattacttcaatcttcacgaacgacttgtt
cgttgtcatcagaaaggcatatttgtcgacgatgaccaaatgtgcggagcttgccatagg
aagattattgtaagagaaccacgaaatatggttgtattttattgcaagcactgttttcac
gaagattgtctatccgactttgaattagtcgagaattgtgtgatatgcaactcgcagaaa
caaattacacatggaaggaagtga
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integrated database retrieval system
