Pseudomyrmex gracilis (graceful twig ant): 109853885
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Entry
109853885 CDS
T05003
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109853885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109853885
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109853885
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109853885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109853885
NCBI-ProteinID:
XP_020282023
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKTKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSIVTSNMPQTVTQQHNSNPVSTQTTHV
LHSQQSQNHNSETEMTTPIPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLISKLPDGNM
SSLKSIAQQVIVRAGLEIPPSEPNRTIFDSAKTSNNNNTNATSEAHIPPLLGVAPLGPVP
LQKEHQMQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagataggtgccttaaaaaagtaacggaa
ggtgtggaaacttttgaagatatctggcaaaaagttcacaatgccacaaacagcaatcaa
aaagagaagtatgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagttggatcgcatcgggtgaaataaaagacaagagtacactgctcgattat
cgaaagttaatcgaaactcaaatggaaagatttaaagtagtggaaagagagacaaaaaca
aaggcttattctaaagaaggtttaggagcagctcagaaattagatccagctcagaaggag
aaagatgaggtgaccaattggctggccaattctatagacgctcttaatctgcagatggat
acatttgaatcggaaatagaatcgttacaggcaggaaagaagaaaagaatagacaaagat
aagcaagatagggtggatgaactgaagacgaaactcgacaaacaccgttatcacatccgt
aaattggagacattattacgtatgcttgacaatatgtctgtcgaagttaacacaattaaa
aggataaaagacgatgtcgagtattacattgaatcttcgcaagatcccgatttcgaagag
aacgagtacatctacgacgatattatcggcctcgatgaagtcgagttgtccggtgttggt
atcccatcgtcagcaacgacggacagcaacaacagcaacgaaaccggtggtacaccgacg
tcaactaactcttgtacctcgcctataccatcgccatcgttgagctctactatgcataat
cattcgagtgatagttctacggataacgacaagaaaacgaagccggtgaaaccaacagca
gtcaggccgctattgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aagtcgaacatgttgtcgagcagcactccaagcaaaaccattcccatgacgcctagccac
agctcgcctagttccacaagcaatcacattgccacgactaacgcaggcaattttgccacc
gtagctgcctcgcatagcaattcgcaagccatccattctacctctaataaaacatccacc
cataacagcgaaaataacattttatcgtcatcatccacgtccatcgttacgtcgaacatg
ccgcaaacggtcacgcagcagcacaacagcaatccggtctcgacgcagacaacgcacgtg
ctacacagtcaacaaagccagaatcacaatagcgaaacggaaatgaccacaccgataccg
ccgtcgtcgtccccgcagtcgtcggtcagcagtagatcctcgccgatgcccgcaaactcc
tgctcgccagcaccgtccactgccaatggtctcatctctaagcttcccgatggaaacatg
tcctctctaaaatccattgcccaacaagtaattgtccgagcaggtctggagataccaccc
tccgagccgaacagaaccatctttgacagtgccaagactagtaacaacaacaacaccaac
gctacgtcggaagcacacattcctccgttacttggagtcgcgcctctcggacctgtgccg
ctgcagaaggagcatcagatgcagttccaaatgatggaagccgcctactatcatatgcca
catccgtctgactcggaaagactacgttcgtatttgccgaggaacacgtgcacgacgcca
ccttattatcagcaagttcagcttcctcactcagatactgtggagttcttccaacgtctt
tctacggaaactttattcttcatattttattatatggaaggatctaagggacagtatttg
gcagcgaaagctctgaaaaaacagagctggaggtttcataccaagtacatgatgtggttc
cagagacacgaggaaccaaaagttattaacgaggaatacgaacagggaacgtacatctat
tttgactacgaaaagtggggtcagaggaaaaaggaaggatttactttcgagtataagtac
ttagaggacagagacctgaactaa
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