Pseudomyrmex gracilis (graceful twig ant): 109854075
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Entry
109854075 CDS
T05003
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
pgc03015
mRNA surveillance pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109854075
09122 Translation
03013 Nucleocytoplasmic transport
109854075
03015 mRNA surveillance pathway
109854075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109854075
03041 Spliceosome [BR:
pgc03041
]
109854075
03009 Ribosome biogenesis [BR:
pgc03009
]
109854075
03012 Translation factors [BR:
pgc03012
]
109854075
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109854075
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109854075
mRNA cycle factors
Stress granule specific factors
109854075
Spliceosome [BR:
pgc03041
]
Complex C
Other components
EJC/TREX
109854075
Ribosome biogenesis [BR:
pgc03009
]
Eukaryotic type
90S particles
Helicases
109854075
Translation factors [BR:
pgc03012
]
Eukaryotic type
Initiation factors
eIF-4
109854075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
AAA_22
UvrD-helicase
AAA_30
TniB
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
109854075
NCBI-ProteinID:
XP_020282388
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MADKSRRVTQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCCMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaatctcgtcgtgtaacgcaaacagaagatttgtcaaacgttgagtttgaa
accagtgaagatgttgaagttattcctactttcgataacatgggtctccgtgatgaattg
ctacgcgggatctatgcctatggttttgagaaaccatctgctattcagcaacgatccata
aagcccattatgaagggccgagatgttatagcccaagcacaatctggaacaggaaaaact
gctaccttttcgatcgcaatattgcaatcgttagatacacaagtacgagagactcaagtt
ttggttttatcaccaactagagaacttgctacacaaattcaaaaagttattctcgcattg
ggcgactttatgaatgttcaatgccacgcttgcattggcggtacaaatcttggagaagac
atcaggaagttagattatggtcagcatgttgtatccggtacacctggtagagtgtttgat
atgattaaaagacgagtacttagaactagagctataaaaatgctagtactggatgagtca
gacgaaatgttgaataaaggtttcaaagaacagatttacgatgtgtacagatatttgcca
ccggcaacacaagttgttttggtttcggctactctaccgcatgaaattcttgagatgacc
agtaaatttatgaccgatcctattcgcattcttgtcaaacgtgatgaattgacactggaa
ggaatcaaacaattctttgttgccgttgaacgagaggaatggaaatttgacacactctgc
gatttatatgacacattgacaataacacaagcagttatcttctgcaatactaaacgtaag
gtagactggttgacggaaaagatgcgagaagccaatttcacagtatgctgcatgcatggc
gacatgccgcaaaaagaacgagacaacataatgaaagagtttcgatctggtcaaagtcgc
gtgctaatcacaacagacgtgtgggcaagaggcatcgacgttcagcaagtgtcgctcgtt
attaattacgatttacctaacaatcgtgaattgtacattcatcgcataggtcgatctgga
cgttttggacgtaaaggtgtatcgataaactttgtgaaaactgacgatataagaattctg
cgagatatcgagcagtattattcgacgcagatagacgaaatgccaatgaatgtagccgat
ttaatataa
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integrated database retrieval system
