Pseudomyrmex gracilis (graceful twig ant): 109854328
Help
Entry
109854328 CDS
T05003
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03022
Basal transcription factors
pgc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109854328
09124 Replication and repair
03420 Nucleotide excision repair
109854328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109854328
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109854328
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109854328
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109854328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-RING_UBOX
zf-C3HC4
zf-P11
zf-RING_2
zf-C3HC4_2
TRAF3_RING
zf-RING_4
DUF3292
Motif
Other DBs
NCBI-GeneID:
109854328
NCBI-ProteinID:
XP_020282886
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKMMVNVCGHALCESCVDLLFLKGSGSCPECKIPLRRTNFRV
QMFEDPMVEKEVSIRKRILRDYNKKEEDFATLREYNDYLEEIESVVYNLTHNIDVIETNK
KIEQYKKDNKEQIVKSKSKLGRSEHELEEIIEMEKQKEEERRIELAKEEVETKKKKIREK
EALIDELTFSDANAKNIIQSFASAIQKQKTEEKISSAPAVKITQFSTGIKFGTPGGGNQP
YVPVSKAEEGPLYTYTPVRQQTDGPLPPNWRELQTRGYVSHIRPESDAERAGGFKANFAC
LRALQEAMASLYHNPSQTQTGLPSV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaagcctgtccgcgatgcaaaaccacgaaatatcgaaatccatcgttgaaa
atgatggtgaatgtatgcggtcacgcattgtgcgaaagttgtgtcgatttattgtttctg
aaaggttcgggatcctgtccggaatgcaagattccattgagaagaacaaactttcgagtt
caaatgttcgaagatcctatggtcgaaaaagaagtgagcataaggaaacgcatcttgcgg
gattacaacaaaaaggaagaagattttgccacgctgagagaatacaacgattacttggaa
gaaattgaaagcgttgtatacaatctgactcacaacattgatgtgattgaaacaaacaag
aagatagaacagtataagaaggataacaaagagcaaatagtgaaaagtaaatctaaactc
ggcagaagcgagcacgagctggaggagataatagaaatggagaagcaaaaagaggaagag
aggaggatagaacttgcaaaggaggaagttgagacgaagaaaaagaaaatacgcgagaaa
gaagctctgatagacgagctgacgttctccgacgcgaatgccaaaaatattattcagtct
ttcgcttccgcgatacagaagcaaaagacggaggagaaaatttcttccgctcctgctgtt
aaaattactcagtttagtacgggtatcaaatttggtactccgggaggaggaaaccaacct
tatgttcctgtttcaaaagcggaggaaggtcctctatatacctacacgcccgttcggcaa
caaacggacgggccattgccacctaattggcgagaactacagactcgcggatacgtttcg
catatacgtcctgaatccgatgcggaaagggcgggcggttttaaagcgaatttcgcgtgt
ttgcgagcgctccaggaagcaatggccagtctatatcacaatccgtcacaaacacagacg
ggacttccatctgtctga
DBGET
integrated database retrieval system
