Pseudomyrmex gracilis (graceful twig ant): 109854347
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Entry
109854347 CDS
T05003
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109854347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109854347
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109854347
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
109854347
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
HHH_5
DNA_pol_lambd_f
IMS_HHH
DUF1805
Motif
Other DBs
NCBI-GeneID:
109854347
NCBI-ProteinID:
XP_020282940
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MDIADFDMIVRHPKVIVHLDVDCFYAQVEMLRHPEFEGKPLGVQQKNIVVTSNYLAREYG
IKKCMPVREALNLCPKLVLINGEDLTNYRHYSNKIFEILHQFTPLVERLGFDDNYLDVTS
LVEKHMKSQNDSELEMSSLSTEKDLKQPIHEIFGPYEEECPCGCHIRLMMGSKIAFEIRS
RIYKELHLTCSAGIAHNKLLAKLAGSVNKPNQQTLIFPCSGPMLLSTVGSVSKIPGVGQK
TTELLLSNNIKTVDDVRRIPLENLELKIGVDLARRLKDNAEGIDDTLVRPSGKRQSIGLE
DGFKNVSLVAEVESRLSALLRRLTELAMEDGRIPIAMRITVRKQVLNKPTSGKRETRQCA
LPKHLLPSTKMGVYDHAKLLKLAMKLFHRIVDVSKPFHLTLLGVAFTKFEERANGRSSIT
SFLRKQVAVDSVLDISSEEGIPEANLGSPMSINQDSNDSSDHSATGLINMSASSLSCSPI
SKSPGVANQGPEDDLLNEVEPLPKKTKLEVWLSGRRESPSNEMADLRLSPSSPMQLSPTV
DAAVFKTLPIERRDVTRSWPTTSKPKPNNILKFFIANK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcagattttgatatgattgtgcgccatccaaaagtcatcgtccacttggat
gttgactgtttctatgcacaagtagagatgctcagacatccggagtttgaaggaaaacct
ttgggtgtacagcagaaaaatatagtagtcactagcaattatctggccagagaatatggg
ataaagaaatgtatgcctgtgagggaagctttgaacttgtgtcccaagctggttttgata
aatggtgaagatttaacaaactatagacattattccaataaaatatttgaaattctgcat
cagtttacaccattggtagaaagattgggttttgatgataattaccttgatgtaacatca
ctagtggagaagcacatgaagtcgcaaaatgattcagaacttgaaatgagtagtttgagt
acagaaaaggatttgaaacaaccaattcatgaaatatttggtccatatgaagaggaatgt
ccatgtggctgccacattcgcttgatgatgggctctaagatagcttttgagattagatcg
cgtatttacaaggaattacatcttacttgcagcgctggaatagcacataacaagcttctg
gctaaattagcaggatctgtaaacaaaccaaatcaacagacactgatatttccatgcagt
ggtccaatgttgctctctacggtaggctctgtatccaaaatacctggtgttggacaaaaa
actacggaattattgttgtcaaacaacataaagacagtagatgatgtgcgtagaatacct
ttggaaaatctggaattgaaaattggcgttgatttagcgagaagattgaaggataacgca
gaaggcatcgacgacacattggtgagaccatctgggaaaagacaatctataggcctggaa
gatggatttaaaaacgtgtcactcgtagctgaggtagagtcgcgattgagcgcgttacta
agaagattaacggagctggctatggaagatggtagaattcccattgccatgagaataaca
gtaagaaaacaagtcttgaacaaacctacttccggcaaaagagaaactagacagtgcgcg
ttgccgaagcatctcttaccgtctacaaaaatgggtgtgtacgatcatgctaaactgctg
aagcttgcgatgaagctgttccatcgaattgttgacgtctccaagccattccacttgacg
ctgctgggagttgcgttcaccaagttcgaggagagagccaatggtcggagcagcatcacg
tctttcctgcgcaaacaggtggccgtcgattccgtattggacatcagctccgaggagggc
atacccgaagcgaatttgggatcacctatgagtattaatcaagatagcaacgatagttcg
gatcactcagcgaccggcttgataaacatgtccgcgtcgagtctctcatgctcaccgatt
tcgaaatcgccgggtgtggcgaatcaaggtccggaggacgatttgctgaacgaggtggaa
ccactgccgaagaagaccaagctggaagtgtggcttagcggtcgtcgggaatcgccaagc
aacgaaatggccgatctcaggctgagcccgtcgtcgcccatgcaattgtcccctacggtg
gacgccgcggttttcaagacattgcccatcgagaggagagatgtcactcgttcttggccc
acaaccagcaaaccgaaaccaaacaatatacttaaattcttcatagctaataagtga
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