Pseudomyrmex gracilis (graceful twig ant): 109854417
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Entry
109854417 CDS
T05003
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109854417
09123 Folding, sorting and degradation
03018 RNA degradation
109854417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109854417
03041 Spliceosome [BR:
pgc03041
]
109854417
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109854417
mRNA degradation factors
5'-3' decay
Lsm complex
109854417
Spliceosome [BR:
pgc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109854417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109854417
NCBI-ProteinID:
XP_020283074
LinkDB
All DBs
Position
Unknown
AA seq
141 aa
AA seq
DB search
MLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDIQTKTRGRGEVKGRGQAQRGRGGGRGTFGRGGRGPAPL
GRGGGTQGGTGNKIQNKPRPK
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctttaaccttattgaagactgcgcaaaatcatcctatgttagtggaactaaaa
aatggagaaacgtacaacggtcatttagttagctgtgataattggatgaacataaatctc
agagaggttatatgcacatcgagggatggtgataagttctggagaatgcctgaatgctat
ataagaggcagcacaataaaatatttaagaattccggatgaggtgatagatatggtaaag
gaggatatacaaacaaaaacaagaggtcgtggtgaagtaaaaggtcgtggccaagctcag
agaggacgtggtggtggaagaggaacttttggaagaggaggaagaggtccagcacctttg
ggtcgtggcggtggtacccaaggtggtacagggaataaaatacaaaataaaccaagacct
aaataa
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integrated database retrieval system
