Pseudomyrmex gracilis (graceful twig ant): 109854671
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Entry
109854671 CDS
T05003
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109854671
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109854671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Zn_Ribbon_YjdM
Zn_Ribbon_TF
DUF3306
Motif
Other DBs
NCBI-GeneID:
109854671
NCBI-ProteinID:
XP_020283590
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MVKCENCGSAEFYKDSGFFFCASCQTQSQDVGQEVEFVYPTENVRLKKTRIRSVRSGNAD
AEAVGWTSWELYNFALIGLTNELIELGASANIKMTVLQLWARYLGKLEVAFMSTKKKLVP
KLSRRYKKRDAAIIYGKILSKTKKRKRKRTETNVTETEACLSDEISMRHINRNKKLMMTA
DYDRHMQLQANSEGDTLSTFSQSAQSTVGSENRSFRIKFNASAKKEAKKVKQLAKGVPKH
KRRKYKETHVTTEYRSGPEIITTSKLLAILYLSLRIHNQDIHLGDMLRYGREGHLSYYRL
DCLVPPEVELTKQETNFLSRVTDVTHKGMRRIIGRMAKFLGVRHIICPNFLPLINRYCSE
LALPNGISLYAERLIALSPPKLFDMIFHKRFHIPNYEGRAMAFIIVVMKILLGLDNVTEY
EISNVADRINSAINVEGISDVKLFSFREWQMYVECRRTVLINAHCPTKLKHSPNTPDVNS
LYLRFLEFIDSKTDRKSEITTRKHLMPSQLVETMKQCISVVSHIDLPLNEVTQFLPSLTP
HRSYLQQLLENPLHDLPRILQSDFCSTKIGYMTKPEYICRLAAEHDVQVNFIDSNLHFVE
KLVPLFEQKKMPSVKELQEKVVVQDQLEDITCVEGKEDFTEYLHRNVPCEIKIDATKSQY
YRERRHAAAAAETDNVFAFAETLPNGKLSIPDRNDTKSDALENEEVSKEELLSKFCKTYN
LDLSRAEERVLLTGSNLRRKQKRESVRDVRGKFVKSNDVTQKTPSSDCPIKSETISPDNV
DLEDVSDLLPNISDILNASSNASIFNDLINDQSENRCETTNELAFGDLLNLQSDKLNDGV
LRLFRPFKDYWMYHCVFSRVKPKNFELFEKMLPKSFRWLLNECANTIEMPIEDFYQELCV
VEELLEKFIAQLGSTE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagtgcgaaaattgcggcagcgctgagttttacaaagactctggttttttcttt
tgtgcatcgtgtcagacgcaaagtcaggatgttggacaagaggtggaattcgtataccca
acagagaatgtgagattaaaaaaaacgagaattcgttctgtgagaagtggcaacgcagat
gcagaggcagtaggatggacatcctgggaactgtataactttgctttaatcggcctgaca
aacgagcttattgagcttggtgcatcagctaatataaagatgacagtgttgcaactatgg
gcgcggtatttaggaaaattagaggtagctttcatgtctacaaagaaaaagctagtaccc
aaactatcaagaagatacaagaagagggatgctgcaattatatatggcaagattttatca
aagaccaaaaaaagaaaaagaaaaagaactgaaactaatgtgacagaaaccgaagcttgt
ttgagtgatgaaatctccatgagacacataaatagaaacaagaaattaatgatgactgca
gactacgataggcacatgcagttacaagctaactcagagggagatacgcttagtacattt
agtcagagtgcgcagtccactgtaggaagtgaaaatagaagttttagaataaaatttaat
gcctcagccaagaaagaggccaaaaaagttaaacaactggcgaaaggagtaccaaaacac
aaacgtaggaaatacaaggaaacccacgtaacaactgaatatagatccggaccggaaatt
atcacaacctccaaattgctggcgattttgtatctgagtttgaggattcacaatcaggat
atacatctgggtgatatgttgagatacgggagagaaggtcatttgtcgtattacagacta
gattgtctggtacctcctgaggtagagctgacgaaacaggagacgaatttcttatcgcgc
gttacggacgtaactcacaaaggtatgaggaggataattggacgaatggcgaaatttctc
ggggtcagacacataatctgtccaaatttcttgccgctcatcaatcgatactgcagcgaa
ttagctctaccaaatggaatatcgctgtacgcggaaagactgatagctctgtcgccccca
aaattgtttgatatgatattccataaaaggtttcacattcctaattacgaaggtcgtgct
atggcatttattatcgtagtgatgaaaatattactgggtttggataacgtaacggaatac
gaaatcagtaacgttgctgatagaatcaatagtgcaattaacgtcgaaggtatcagtgac
gtgaaactgttcagtttccgtgagtggcagatgtacgtcgagtgcagaagaaccgtgttg
atcaacgcgcactgtcccaccaaactcaagcacagtccgaacacgccggacgtcaacagt
ctgtacctgagattcttggagtttattgactcgaaaacggacagaaaatccgagataacc
acgcgcaagcatctgatgccatctcaactcgttgaaacgatgaaacagtgcatcagcgtc
gtaagtcacattgatctgccgctgaacgaagtcactcaattccttccctcgctgacgcca
catcggtcgtatcttcaacaactgctggaaaatccgttgcacgatcttccgagaatattg
cagagtgacttttgctccacgaagattggctacatgacgaaaccagaatatatttgcaga
ctggctgcggaacacgacgtgcaagtgaattttatcgattcgaatctgcactttgtggaa
aaactcgtgccgcttttcgagcagaaaaagatgccttctgtgaaggaattgcaggaaaaa
gtcgtggtgcaagatcagcttgaggatattacgtgtgtcgaggggaaggaagacttcact
gagtatttgcacagaaacgtgccgtgcgagattaaaattgacgcgacgaagagccagtat
tacagagagagacgacacgcggccgccgccgcggaaacggataacgtgttcgcgttcgct
gagactcttccgaacggcaaactgtcgatcccggatagaaacgataccaagagcgacgcg
ttggagaacgaagaagtttccaaagaagaattgttgtccaagttttgcaaaacgtacaat
ctggatctctcgcgcgctgaggagagagtcttgttgacgggttcgaacttgaggagaaaa
cagaagcgcgaatctgtcagagacgtgcgcggcaaatttgtcaaatctaacgatgttact
cagaaaactccgagctccgactgcccgataaaatctgaaacaatttcgccggacaatgtc
gacctggaagacgtttccgatttgctgccgaatatttccgacattttgaatgcgagcagt
aacgcgtctatttttaatgacttgataaatgatcagtcggagaaccgttgtgaaacgacg
aacgagctggcgttcggcgatctcttgaacctgcaaagcgacaagttgaacgacggcgtt
ctcagactgttcagacccttcaaggactattggatgtatcattgcgtcttcagtcgcgtt
aagccaaagaatttcgaattattcgagaagatgctgccgaagagtttccgatggttgctg
aacgaatgcgcgaacaccatcgaaatgccaatcgaagatttttaccaagaactatgtgtt
gtcgaggagttgttggagaagtttatcgcgcaacttggttcgacagaataa
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