KEGG   Pseudomyrmex gracilis (graceful twig ant): 109854712
Entry
109854712         CDS       T05003                                 
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
  KO
K14961  COMPASS component SWD1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgc03036]
    109854712
Chromosome and associated proteins [BR:pgc03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     109854712
    COMPASS/SET1 complex (yeast)
     109854712
    MLL-HCF complex
     109854712
    MLL3/MLL4 complex
     109854712
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_LRRK2 Beta-prop_SPT8 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_WDR11_1st Beta-prop_TEP1_C Frtz WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 109854712
NCBI-ProteinID: XP_020283699
LinkDB
Position
Unknown
AA seq 468 aa
MNLELLESFGQNYPEEFDGTLDSLSFAVTCTFNKRGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHVHPVCSLSWSRNGHKILSASTDNNVCIWDVLSGECDQKYRFPSPILKVQFNPRNS
NKFLVCPIRHAAVMVDVEGTHRVLPLDEDSDLNIVASFDRRGEYVYTGNARGRVLVLDAE
TLAVKASYKITQGTASNTAVKSIEFARRGSCFLVSTSDRVIRVYDSTEILACGKDGEPEP
IQKLQDLVNKTMWKKCCFSGDGEYVCAGTTRTHALYIWEKSIGNLLKILHGTKGELLLDV
VWHPVRPIIASVASGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDLSDEDKSV
VQGEETQDEEIEVDVASIDKVAAFCSSDEETEDVGSLQFLPISPDVEESEDTQIASHEPP
TKKYRSHDINLQGAPTDETHPHVLLLTKGKDKPTTKKGRPRLEHRKGK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaatttggagttattagaatcttttggtcaaaactatccagaggaatttgatggtact
ttagactctctgtcttttgctgtgacttgtacatttaataaaagaggaacactgctggct
gttggatgcaatgacggaagaatagtaatttgggattttctgacacgtggtatagccaag
attatcagtgctcatgtacatcctgtttgttccttaagttggtccagaaatggtcataag
atcttgagtgcttctacagataataatgtgtgcatatgggatgttctgtctggagaatgt
gatcagaaatatagatttccttcaccaatactgaaagtacagtttaatccaagaaattct
aataagtttttggtatgtccaatacgccatgctgctgttatggttgatgttgagggaaca
cacagagttctaccacttgatgaagatagtgacttgaacatagtagcatcttttgatcga
cgtggtgaatatgtttacactggaaacgcccgtggcagagttctagtacttgatgccgag
acattggctgtaaaagcttcttacaaaataacacaaggaactgctagtaacacggcagta
aaaagtattgagtttgcgcgtcgcggctcgtgtttcctggttagtacgtctgacagagtg
attcgcgtatacgatagtactgagatattggcatgtggcaaggacggtgaacccgaaccg
attcaaaaattacaagatctggtaaataaaacaatgtggaaaaaatgttgtttttcgggt
gacggtgaatatgtgtgcgctggaacaacaagaacgcatgctctttatatttgggaaaaa
agtattggaaatttactaaaaatcttgcacggtactaaaggcgaacttttactcgatgtt
gtgtggcatccggtgaggcctataattgcgtctgtggcatcgggtgtggtgtctatttgg
gcacaaaaccaggtcgagaattggtctgcatttgcaccagatttcaaggaactagatgaa
aacgttgaatacgaagaaagagagagcgaattcgatttgagtgacgaagataagtccgtg
gtacaaggagaagagactcaggatgaagaaatagaagttgatgttgcatcaattgataag
gtcgctgcattctgcagctccgatgaagagactgaagatgtcggttctcttcaattccta
cccatatctccggatgtggaggagtccgaagatactcaaatagcatctcatgaaccgcca
acaaaaaaataccgttcccatgatataaatttacaaggtgcaccgactgacgaaactcat
cctcacgttttgttattaactaagggaaaagataaaccaacaacaaaaaagggaagaccg
cgactggagcacagaaagggaaaatga

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