KEGG   Pseudomyrmex gracilis (graceful twig ant): 109854754
Entry
109854754         CDS       T05003                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109854754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgc03041]
    109854754
   03036 Chromosome and associated proteins [BR:pgc03036]
    109854754
Spliceosome [BR:pgc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109854754
 Complex B
    109854754
 Complex C
   U2 SnRNP specific factors
    109854754
Chromosome and associated proteins [BR:pgc03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    109854754
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 109854754
NCBI-ProteinID: XP_020283766
LinkDB
Position
Unknown
AA seq 1305 aa
MESIPRTHEDIEAQIREIQSKKKEISNNASEKEQQVGLGKTGFYDQDIYDGSNNKFDGYV
TSIAANDEIEDYDPFADRRISTLADKREEEKNYDPFADRRRPTIADREDEYRQKRQRMII
SPERVDPFAEGGKTPDIGSRTYTEIMREQMLKGEEMELRKRLAEKAKDGTLKANGESKLA
PKKRGRWDQTDDAPATKKLSSVAATPTWDNADVTPAAIRWDETPGHGKGAETPGATPGVS
TRMWDATPAHATPGAATPGRETPSHEKTVTSRRNRWDETPKTERETPGHGSGWAETPRTD
RVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQATILTPSAVTPT
GPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDEELDAMFPPGYKILQPPAG
YIPIRTPARKLTATPTPIAGTPQGFFIQTENKDAKYMDNQPKGNLPFMKPEDTQYFDKLL
VDVDEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLL
MSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISN
LAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQ
ARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALAIAALAEAATPY
GIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQS
PDEEMKKIVLKVVKQCCATDGVEAQYIKDEILPHFFKHFWNHRMALDRRNYRQLVDTTVE
IANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRLEEQLIDGILYA
FQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIA
VVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPR
LTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVN
TFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP
ELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTACAAIKHMALGV
YGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQYTLQGLFHPAR
KVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3918 nt   +upstreamnt  +downstreamnt
atggagtccattccaagaacgcatgaagatatcgaggcgcaaataagggaaattcaatcg
aaaaaaaaggagatttcgaacaatgcatccgaaaaggagcaacaagtcggtttggggaaa
actggcttttatgaccaagacatttatgatggcagcaacaacaaatttgacggctatgtt
acatcaatcgcggcaaacgatgaaatcgaggattatgatccattcgcagacagacgaatt
tccaccttagctgataaaagagaagaggagaagaattatgatccgtttgcagatagacga
agaccaactatagctgatagagaagatgaatatagacagaaaagacagagaatgatcatc
tctcctgagagagttgatccttttgcagaaggtggcaagactcctgatattggttccaga
acttacactgagattatgcgagaacaaatgcttaaaggtgaagaaatggagttgagaaaa
agattagcagaaaaggcaaaagatggtaccctaaaagctaatggtgaatctaaattagca
ccaaagaagagaggacgttgggatcaaacagatgatgctccagcaacaaagaagttatct
agcgttgcagcaacaccaacttgggataatgcagatgtgacaccagctgctattaggtgg
gatgaaactccgggacatggtaaaggagcagaaactcctggagctactccaggagtgagt
acaagaatgtgggatgcaacaccagctcacgcaacaccaggagctgctacgccgggtaga
gaaacaccctctcatgaaaaaaccgtgacaagtcgaagaaaccgctgggatgaaactccg
aaaaccgaacgagaaactcctggacatggcagtggctgggcagagactccaagaactgat
cgagtcgctggagacttgatacaggaaaccccgacgccttcagcaagcaaaaggcgaagt
cgatgggatgaaacaccatcgaatcaaacacctggctcgatgacgccacaaactccggcg
acgcctctcactacaccccatcaagcgacgatactgactccaagtgccgtcacaccgacg
ggtccgaaagcaatgggtctggctactccgactccgggacatttgatgtctatgacaccc
gaacaactgcaggcatatcgctgggaacgtgagatagatgagcgaaatagacctctatcg
gatgaggaactggatgcgatgtttccacctggatacaagatattacagccaccggcagga
tacatacctatccgtacgcccgctaggaagctcacagcaacaccaacacccattgctggc
acacctcaaggtttctttattcaaacggaaaacaaagatgccaaatacatggacaatcaa
ccgaaaggcaatttaccgtttatgaaaccagaagacacgcaatattttgacaagttgtta
gtcgatgttgacgaagaaacattgagtcctgaggaacaaaaagagagaaaaattatgaaa
cttttactaaagataaagaacggaactcctcctatgcgaaaagctgctttgagacaaatt
actgataaggcgagagaattcggagctggtcccctctttaatcagattcttccacttctc
atgtcacctactctggaggatcaagaacgtcacttgttggtcaaagttattgatcgtatt
ctgtataaactggatgatttagtacggccgtacgtgcataagattctcgtcgtcatcgaa
cctcttctaatcgatgaagattactatgctcgcgtcgaaggtcgagaaattatttcgaat
ttggcaaaggccgctggtctggctacaatgatttccacaatgagaccagatatcgataat
atcgacgaatacgtacgtaacacaacagcaagagcatttgccgttgtcgcttctgctctt
ggaataccttcacttctgccattcttgaaagccgtttgtcgcagcaagaaatcgtggcaa
gcacgacacactggtatcaagatcgtacaacaaattgctatcttaatgggttgcgctatt
ttgccacacttgaagagcttggtggaaattatagaacacggtctggtggacgagcaacaa
aaagtacgaactattactgcgttagctatcgctgctttggctgaagctgcaacaccatac
ggtatcgaaagcttcgactcggtgctaaaacccctgtggaaaggtatccgaacgcataga
ggtaaaggtctagctgcgtttttgaaggctatcggttatctcatacctctgatggacgca
gaatatgcgaattattacactagggaagtaatgttaattcttatacgcgaattccagtct
cctgatgaagagatgaaaaagatcgtgttgaaggtagtcaaacaatgttgcgcgacagat
ggtgtggaagctcagtacataaaggacgaaattctgcctcacttcttcaaacacttttgg
aatcatcgtatggcattggatcgtcgaaattacagacagcttgtggacacaaccgtggaa
atagccaacaaagtgggcgcatcagagattataaacagagtagtggacgatttaaaggac
gaaaatgaacagtatagaaaaatggtgatggaaacaatcgagaaaataatgggcaatttg
ggagcggcggatgtcgactctcgtttagaggaacagctgatcgatggaattctctacgct
tttcaagaacaaacaacagaggatgttgtcatgctgaacggttttggtactatcgtgaat
acgctaggtaagagagtaaaggcgtatcttccccaaatatgcggtacgatcttgtggaga
ttgaacaacaaatctgcaaaagtccgacaacaagctgcggatcttatttcgcgtattgcc
gtggtaatgaagacttgtcaagaggaaaaattgatgggacacttgggagttgtcttgtat
gaatatttaggcgaggaatatccggaagtactgggtagcatcttgggagcgttaaaagcc
atcgtgaacgttataggaatgaccaaaatgacaccgcctatcaaagatcttttaccgaga
ctcacgcctattctgaaaaacagacatgagaaagtgcaggaaaattgtatcgacctcgtg
ggtagaatcgcggatcgaggtcctgagtacgtttctgctcgagaatggatgagaatatgc
tttgaactgttggaattgctgaaagcgcataaaaaggccatcagaagagcgacagtaaat
acgtttggttatattgccaaagctattgggccgcacgatgtcttagcgacgcttctaaac
aatttgaaagtccaggaacgtcagaatcgtgtttgcaccacggtcgctattgctattgtt
gctgaaacttgcagtccttttacagtattgcccgcgttgatgaacgaatatagagtacct
gagttgaatgtgcagaacggagtgttgaaatctttgtcgtttttgttcgaatacatcggt
gagatgggtaaagattacatctacgccgttagtccattgttggaagatgcgctcatggat
agggatttagtacacaggcagactgcgtgcgccgccattaaacacatggcattaggcgtt
tacggatttggatgcgaagatgcgttaatccacttactgaatcatgtgtggcccaatgtt
ttcgagacgtcgccgcatttggtgcaagcctttatggatgctgtggacggactacgcgtt
gcacttggtccaattaagatactgcagtacacattacagggtttattccatccggctcgc
aaagttcgcgacgtatactggaaaatatataattccctttacataggtggacaagatgct
cttgtggctggttatcctcgaatcatgaacgatccaaagaaccagtacataagatatgaa
ttagattatgtattgtaa

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