KEGG   Pseudomyrmex gracilis (graceful twig ant): 109854870
Entry
109854870         CDS       T05003                                 
Name
(RefSeq) protein CLP1 homolog isoform X1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109854870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109854870
Enzymes [BR:pgc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     109854870
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     109854870
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 MMR_HSR1 AAA_22 nSTAND3 CTV_P13 AAA_16 AAA_18
Other DBs
NCBI-GeneID: 109854870
NCBI-ProteinID: XP_020284022
LinkDB
Position
Unknown
AA seq 422 aa
MTDEKSTVQEFKLDPDCELRFEVESKNEKVTLELKSGLAEVFGTELVKGKKYEFIAGAKV
AVYTWQGCTVELIGKTDVSYVAKETPMGLYLNCHAAMERIRENAEKDDTRGPITMVVGPC
DVGKSTLCRILLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNVVEGFSQQAP
LVFHFGHKTPSSNLALYNLLVTRLAEVCSDRLQANKKAKASGIIINTCGWIKGQGYKILT
HAAQAFEIDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQTQRTEARDQSVRE
YFYGSRTPLYPHSFEVKWSEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPSLLH
HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVERQTFTVLSPQPRPLPNTVLLLSDIQFMD
SH
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaccgacgagaaatccacggttcaagaatttaaactggatccagattgcgaattgaga
ttcgaagtggagagcaaaaatgagaaagttacattagagttaaagagcggccttgcagag
gttttcgggacggaactggtaaaaggaaaaaaatatgagtttatcgctggtgcaaaagtc
gctgtttacacctggcagggttgtactgtcgagcttatcggtaagactgatgtcagttac
gtggctaaagaaacaccaatgggcttgtatttgaattgtcacgcagcgatggaacggata
cgagagaatgcagaaaaggacgacaccagaggtccaataacaatggttgtgggtccgtgc
gatgttggaaaatccacactgtgtagaattctgttaaattatgctgttagaatgggtaga
aggccaatttttgtcgatcttgacgttggccaaggacacatagccatccccggcacagtt
ggtgctttactagtggaacgaccgtccaatgtagtagaaggtttcagtcagcaagctccg
ttggtcttccacttcggacacaaaacgccatcgtccaacttggcattgtataatttactc
gtaacacggttggcggaggtctgttctgacagattgcaagccaacaagaaagccaaagcg
tcgggaatcatcataaacacatgcggttggatcaaaggtcaaggttacaagatactcacg
cacgctgcacaggcttttgaaatcgacgcgattttagtgctggatcaagagagactgtac
aacgagctggtgagagacatgccggattttgtaaaagtggttttcttgccgaagagcggc
ggagttgtcgagagaagtcaaacacagagaacggaagcgagggatcagagcgtgagagag
tatttttacggctcgcgaacgccgttgtatcctcacagcttcgaggtcaagtggagcgag
gccagactttacaaaatcggagcgcctgttttaccggcgtcttgcatgcctttgggcatg
aaggcggaggacaatttgacgaaactggtggctgtcacgccgggacccagtttgctacat
catctgttatccgtttcgttcgctgattctcctgaggatgatgttgtacaaactaacgta
gctggatttgtttgtgtaacgaatgtggacgttgagagacagacgttcacggtgctcagt
ccgcaacctagaccgttgccaaacacagtcctcttgttgtcggatatacaatttatggat
agtcactag

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