Pseudomyrmex gracilis (graceful twig ant): 109855019
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Entry
109855019 CDS
T05003
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04140
Autophagy - animal
pgc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109855019
04148 Efferocytosis
109855019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109855019
Membrane trafficking [BR:
pgc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109855019
Hops complex
109855019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-RING_16
zf_RING_Vps8
zf-RING_2
zf-C3HC4
zf-RING_Vps41
zf-C3H2C3
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-rbx1
COMP
Motif
Other DBs
NCBI-GeneID:
109855019
NCBI-ProteinID:
XP_020284361
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVLAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDRILHL
VVSSNTIVIAMANNILLRIDMKQPEKTEEIDISKYALSMKMSGLFLDPLGHHLLITLVPK
HGDNPPPELYYLHRKTTKLKQAGKFKGHEITAVGWNFSNTSETSSGPILLGTSKGLIFET
EIGLETDKIFNTSLEQYWRQLPNYLPLYGTKEVGGLVFDIGKNSKPPITGIEFHKIPNSD
KYMIIVTTLMRIYQYIGVVSNPEEKPLLQQVFYRYLNAQESFSEVISSLPYSKMQFYYPS
LGAVPKSFGWLTETGILYAEVDAKPDTNNVLVNQQMLTCPEMSLMSSNIPKTTSTPLSFV
LTEFHALLLYPDHVKGMSLLNQELIFEDVYNDAVGKLIGITKDPATRSIWAYSERAVFKY
KVTKEDRNVWQVYVDKGEFELAKQYCKDNPAHIDQVLVKQAEILFKEKEYEKSALIYADT
HSSFEEISLKFLQEWQIEALKTFLRKKLDGLKTQDKTQITMIIIWVIELFMNQMGILRSS
NTSYLHDPQYIKLQKQFDSFLANPKVEECIRRNRTTIYDLMASHGDKDNLIRLTIMHCNY
EEVIRQHLYKNNYLEALGVLKSQINQDLFYQFAGILLQELPRPTVAALISQGSSLEPTKL
LPALISCNSDDKHAKEIIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQDEVMRYISSQGQ
DVSMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTISVDLAKQIAAMPSDH
DDELRKKLWLKIAEHVVREKDDIKQAMEFLQHCDLVRIEDILPFFSDFVTIDHFKEAICN
SLQEYNQHIQDLKEEMQEATKAAELIRKDIQAFRTRCTFVHARDTCNTCEVQLLLRPFYV
FPCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTLISNRPEDTTSMTSVSLSTRDQIK
ADIDELVASECLYCGELMIESIDKPFIEEEDYERVMKEWT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaatgttcgatcagtacgagcaagcttctcagcgctccaagcaagtgcttgct
ccaccaattcgtccagatattagcacagcgggctttattcaaatgaagctgcaagatgac
gggccgatatttaccaagcagaaagtcaacttcttaccgtcggatagaattcttcacctg
gttgtcagtagcaatacaattgtaattgctatggccaacaacattttgttgcgtatcgat
atgaagcagcctgagaagactgaagaaattgatatatccaaatacgcattgagtatgaaa
atgtccggcttgtttctggatccactgggtcatcatttgctgataactttggtgcccaaa
cacggggataatcctcctccggaattatactatttacacagaaagacaacaaagctcaaa
caagccggcaagttcaaaggtcatgaaattactgctgtgggttggaatttttcgaatacc
tcagaaacttcctccggtcccattctactcgggacctccaagggtttgatatttgaaaca
gaaattggactggaaactgacaagatttttaacacaagtctggagcagtattggcgtcag
cttccaaattatttacctctttacggtacgaaagaggtaggaggattggtattcgacatt
ggaaaaaatagcaaacctccaataactggaatagagttccacaaaataccgaattctgat
aaatacatgatcattgtgacaactctcatgcgcatttatcagtacatcggtgtcgttagc
aatcccgaagagaaacctcttttgcagcaagtgttctatagatatttgaatgcgcaagag
agctttagtgaagtgataagttctctgccgtattcaaaaatgcaattttattatccatct
ctgggtgctgtgccgaaatcattcggatggttaacggaaactggtattttatacgccgag
gttgatgcaaaaccagatacaaacaacgtgctggtaaatcagcagatgttaacatgtccg
gaaatgagtcttatgagcagcaacattccaaaaacgacatcgacgcctttatcttttgta
ttgacggaatttcatgcattgctgttatatccagatcatgtaaaaggcatgtcgctccta
aaccaggagttgatatttgaagacgtttataatgatgcagttggtaaattaattggcatc
accaaagatcccgcaacacgatcgatctgggcttatagcgagcgggccgttttcaagtat
aaagtaacaaaagaagataggaatgtttggcaggtgtacgtcgacaaaggtgaatttgaa
ctggctaagcaatattgtaaagacaatccggcgcacatagaccaagtgcttgtaaaacag
gcggaaatactttttaaagagaaagaatacgagaagagcgcgctaatatacgcggatact
cactcgtccttcgaggaaatatcattgaagtttctacaagaatggcagatcgaagccttg
aaaacatttctgcgcaagaaactcgatggcttgaagacacaagataaaacacagataacg
atgatcataatttgggtgatagagctgttcatgaaccaaatgggaattctgcggagcagt
aacacatcctatcttcacgatccgcaatatataaaactgcagaaacaattcgacagtttt
ctcgccaatcccaaagtcgaggaatgcatcagaagaaatcgcacgacgatatacgacttg
atggccagtcacggtgataaagacaatctgatacgtttgacaataatgcactgcaactac
gaggaagtaatccgccaacatctgtacaagaataactacttggaggcgcttggagtgctc
aagagccagatcaaccaagatcttttctatcaattcgccggcattctgcttcaggagttg
ccgcggcccacagttgccgctttgatctcacagggatcgtcattggagccaacaaaactt
ctaccggctctgatttcatgcaacagtgatgacaagcacgcgaaagagattattaaatac
ctggagttttgtgtatataagcagggctcgcaagagcaagcgattcataactttcttctg
tctttgtacgcacgttacaaacaagacgaagtaatgcgatatataagctctcaaggtcaa
gatgtcagcatggtgcactacgatgtgcattacgcgttacgattgtgtcaggaagtaggt
ctgacggaagcctgcgtgcaattgtcggctttgctcggtttatggaccaccgccgtcgat
cttgcccttacgattagcgtggacctcgccaagcaaatcgcagccatgccgtctgatcac
gatgacgagttgagaaagaaactctggttgaaaatagcggaacatgtggtacgagaaaaa
gacgacataaaacaagcaatggaatttttgcaacactgcgatttagtcaggatcgaagat
attctgccgtttttttctgatttcgttacgattgatcacttcaaagaagctatttgcaat
tccttgcaggagtataaccaacatattcaggatcttaaggaagaaatgcaggaagccaca
aaggcggcagagttaataagaaaagatattcaggctttcagaaccagatgtacctttgtg
cacgcaagagatacatgcaacacatgcgaggtgcaattgcttttgaggcctttttatgta
tttccttgcggacataaatttcacagcgattgtttggtggcggcattaacgcccatgttg
tctatggaccagaggacaaagttggcggatcttcagcgacaacttactctcatttcgaat
cgacctgaagacactacttcgatgacttccgtgtctttgtcaacgagagatcaaatcaag
gccgacatcgatgaactagtggcttccgagtgcctctattgcggagaacttatgatagag
tcgatagataagccattcattgaggaggaggattacgaacgcgtgatgaaagagtggacg
tga
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