Pseudomyrmex gracilis (graceful twig ant): 109855209
Help
Entry
109855209 CDS
T05003
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109855209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109855209
03041 Spliceosome [BR:
pgc03041
]
109855209
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109855209
Spliceosome [BR:
pgc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109855209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_like
EIF3I
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
PQQ
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
109855209
NCBI-ProteinID:
XP_020284742
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MIDATDKKLLYNTVLSQTFSPDGNYLLAGNIYGDVSVFDLVKTLGPNKIEENELQGPNYR
FVAHLDQEVACMVTTDDFLVTGTRGEISGWDWKIITSSKAPNCKVSWNIQIPANKDSYDK
PDVNYMAYSKANHLLYAGCGDNNIYIINLEDGKIVRSMQGHTDYIHCLAIMDNQLASCSE
DGSVRLWDLRKKENTNILTPHLVDKVARPRLGKWIGAIDFTEDWLLCGGGPSLSLWHMRT
MEAATVFDLADQGIYVAEIYEERVIAGGAATHIHHMTYQGEVLAKVPISSLTVYSVVHQE
TPHKILSAAGSSNCIDISTNFNYREMMLKFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgctaccgacaagaaattactgtataacaccgtactatcgcagacgttttca
cccgatggaaattatcttttggctggcaatatttatggagatgtttcagtatttgatctg
gttaagactttaggacctaacaaaatagaagaaaatgagttgcaaggacctaattatcga
tttgttgcacatctcgatcaggaagtcgcatgcatggtcactacggatgattttcttgtg
acaggaacacgtggtgaaatatcaggatgggattggaaaataattacttctagtaaagca
cctaattgtaaagtttcttggaacatacaaatacctgctaataaagatagttacgataag
ccagatgtaaattacatggcatattcaaaagcaaatcatttactttacgctggatgtggg
gataacaatatatatattataaacttggaagatggaaagattgtacgaagtatgcaggga
catacagattacatacattgtctagcaataatggataatcagcttgcatcttgcagcgag
gacggttctgtgagattgtgggatttgcgcaaaaaggaaaacactaatatattaactcca
catttggtggataaagtagccagaccacggttgggaaaatggattggcgctatcgatttc
accgaggattggttgttgtgcggtggcggacccagcctatcgctgtggcacatgcgaacg
atggaagcggcgacagttttcgatttggctgatcagggaatctacgtggcagagatttac
gaggaacgcgtgattgccggtggtgcagcaactcacattcatcacatgacgtatcagggc
gaagtcctcgccaaggtacccatctccagcctcaccgtgtacagcgtagtgcaccaggaa
acaccacataagatacttagcgcggctggttcctcaaattgcattgacatcagtacaaac
ttcaattatcgcgagatgatgctcaaatttgcgtaa
DBGET
integrated database retrieval system
