Pseudomyrmex gracilis (graceful twig ant): 109855224
Help
Entry
109855224 CDS
T05003
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109855224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109855224
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109855224
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109855224
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109855224
U7-dependent histone pre-mRNA processing factors
109855224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
109855224
NCBI-ProteinID:
XP_020284771
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSTKRKSDTQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCLMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLESSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDRESRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNEKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRTLKPPH
VVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
VPKPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQI
AGTLEVIDDKKLRVFKNVDLTIDGKIVTMEWIATPVNDMYADSVLTAILQAELMDQSPKM
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSSE
DETFQQIVQTAVTKLHQSLAPPSDIL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaagagaaaaagcgacactcaagtgccggcggaagagagcgatttgctatcg
atacgtccgcttggcgcgggtcaagaagtcggcagatcgtgcatcatgttggaattcaag
ggtaagaagatcatgctggactgcggcatacatcccggtctgtccggcatggatgctctt
cccttcgtcgatttggtcgaggcggatgagatcgatctcctgttgatttcgcactttcat
ttggatcactgcggagcgctgccctggttcctgcaaaagacaagcttcaaaggtcgctgc
ctcatgacacacgcgacgaaggctatttatcgctggctgttgtccgattacatcaaagtg
agcaacatagccactgaacagatgttgtataccgaatccgatcttgagagcagcatggac
aagatagagaccatcaactttcacgaagagaaagatgtgttcgggatcaagttctgggct
tacaacgcgggtcatgttttaggagcggccatgttcatgatcgagatcgctggtgtgaag
attctgtacaccggggatttcagtcgtcaagaagacagacatctgatggctgccgagatt
ccgaacatacatcccgacgttctgatcacagaatcgacttacggcactcacattcacgaa
aagcgagaggacagagagagtagattcacaaatctcgtacatgaaattgtcaacagagga
ggcagatgtctgatacctgtgtttgcgttgggaagagctcaggagcttcttcttattttg
gacgaatattggagccagcactcggaacttcacgaaataccaatttattacgcctcttcc
ttggccaagaagtgcatggccgtttatcagacctatgtaaacgcgatgaacgagaagatc
agacgacaaatagccattaacaatccgtttgtgttcaagcacatatccaatttgaaagga
atagatcacttcgaagacattggaccgtgcgttgtgatggcttcgcctggtatgatgcaa
agcggcttgtccagagaattgttcgaatcctggtgcacggatgcgaaaaatggcgttata
atagccggttattgcgtcgagggcacgttggccaagacaattttgtcagaacccgaggag
atcacgaccatgtccgggcaaaagttgccgttgaaaatgtctgttgattacatatcgttt
tccgctcatacggattatcaacaaacgtcggaatttattcgcactttgaaaccgcctcac
gttgttctggtacacggcgaacaaaacgaaatgggtcgattgaaagcggcgttgcaacgg
gaatacgaagacgatcccaacacaaccatggagatacacaatccgcgaaacacggtcgcg
gtcgagctctacttcagaggtgagaaaaccgccaaggtgatgggcactctagcgatggaa
gttcccaaaccgggacagaaactgtccggtgttttggttaagagaaatttcaattatcac
atgctcgctccttgcgacctgtccaagtacacggacatgagtatgagccaggtcatacag
cgacagagcgtgtacttctccgcgtcgttgcccgtgctgaaacatctcttaacgcaaata
gccggcacacttgaggtgatcgacgacaagaaactcagagtgttcaagaacgtcgatctc
acgattgacggtaagattgtcacgatggagtggatcgcgaccccggttaacgacatgtac
gcggattccgttctcacggcgatacttcaggccgaactgatggatcagtcgccgaaaatg
ttgcccgctccgaccaagatggatcgaatgcatttcaaagaatgtctcatagagatgttg
caagaaatgttcggcgaggactctgtgcctaagatattcaaaggtgagaaactttatgtc
accgttgacggtaagaaggcgcatatagacctgttgaatctggaggtgaccagcagcgag
gacgagacgtttcagcagatagttcaaacagcggtaacgaaattgcatcagtcgttggca
ccgcctagcgatatattataa
DBGET
integrated database retrieval system
