Pseudomyrmex gracilis (graceful twig ant): 109855230
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Entry
109855230 CDS
T05003
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109855230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109855230
Membrane trafficking [BR:
pgc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109855230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
SOR
Motif
Other DBs
NCBI-GeneID:
109855230
NCBI-ProteinID:
XP_020284826
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MVSLFFSQPMTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGE
LRTSLLSPKSYYELYMTITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLMRDLVEMCRGVQHPLRGLFLRNYLLQCIRNILPDVAEGEDEDG
TVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRERREREREELKILVGTNLVRLSQLESVT
LDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPNQVPGIPQDVKLFDVFSDQIATIIQTRQDMPP
EDIVSLQVALINLAHKCYPDRVDYVDKVLFTTAQIFQKQNVDKLEYNSAVSRELVRLMKI
PVDNYKNILTVLKLEHYAPLLDYFDYEGRKSLAIYIITNILDNETLIPTQEQVDAILSMV
SPLVQDQPDQPIIEEDPEDFAEEQGLLGRLIHHFKSETPDQQYMILSAARKHFSAGGNKR
IKYTLPPIVFQSYQLAFTYKALKDQDEMWQKKCQKIFQFCHTTITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEE
NAEPVRNQCALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGGKVLDCLKKGI
RIASQCMDTSVQVQLYVELLNHYIYFYEKGNTAVTVQILNQVIAKIREELPNLEASEETD
QIQKHLANTLEHLRNRMESPDSDGLSYQGLVL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttgtttttctcacagccaatgacacctgccataacgggaatggaggaacaa
gagaagctgttggaagatgcaattggtgtggtaaaagtacaggctttccaaatgaaacac
tgtttagacaagtccaaactgatggatgcactgaaacatgcctctaccatgttaggagaa
ctcaggacttctcttctaagtccaaagagttattatgaattatatatgacaatcacagat
gaactacggcatttagaattatatttgttggatgaatttcaaaaaggaagaaaagttaca
gatctgtatgaattagtacaatatgttggtaatattgtgcctagactatatttacttatc
acagttggtttggtttacataaaaacaactcctggtttgaaaagagatcttatgagagat
cttgtggagatgtgtaggggtgtgcagcatccgttgcgtggtctgttcttaagaaattat
ttgttgcagtgtataagaaatattttaccagacgttgctgaaggcgaggatgaagatggg
actgttcgcgacagcatagattttgttctgatgaattttgcagaaatgaacaaattatgg
gtacgcatgcaacatcaaggtcatagcagagatagggaaagaagagaaagagaaagagag
gaacttaaaatcttagtaggaacaaatcttgtacgacttagtcaactggaatctgtaact
ttggataaatataaaaagcttgtactaccaggaattttggaacaggtggttagttgtaga
gatgcaatagcacaggaatatcttatggagtgtataattcaggtatttcctgatgaattt
catttacaaacgttaaatgcatttctgaaatcctgtgcggaattgcaaaatggagtgaac
gtcaagaacataattatatcgttgatcgatcggcttgcagcctttagtcaacggtctgat
ggtgtaggagggccaggaagtcctaatcaagtaccaggaattccgcaagatgtcaaactt
tttgatgtatttagtgatcaaattgcgactattatacagacaagacaagatatgcctccc
gaagatatagtatcccttcaggtagctcttataaacctagcacataaatgctatcctgat
cgggtagattacgttgataaagtcttgttcacaacagctcaaatattccagaaacaaaat
gttgataaattggaatataacagtgccgtttcaagagaattagtgagattaatgaaaatt
cccgtagacaattataagaatatattaaccgtactcaaactagaacattatgcacctctt
ttggattattttgattatgaaggtcgaaaatcgttggccatttatataataacaaatatt
cttgacaatgaaacattgataccgacacaagagcaagtagatgcaatactgtccatggta
tctcccttggtgcaagatcaaccggatcaacctatcatagaggaagatcctgaagatttt
gccgaagagcagggattactaggtagattaatacatcatttcaaatcggaaacaccagat
caacaatatatgatactaagtgccgcaagaaagcactttagcgctggtggtaataaaaga
ataaaatacactttgccgcccatagtattccaaagttatcaattggcatttacatataaa
gcattgaaggatcaggatgaaatgtggcaaaagaagtgtcaaaaaatttttcagttttgt
cacacaactattaccgcgttaatgaaagccgaattagccgaactacctttaagattattt
ttgcaaggcgcaatagcgatcggcgaaatccgtttcgataatttcgagatggtcgcttat
gaatttatgagtcaagcattttcgatatacgaagatgaaataagcgattcgaaggcgcag
ctcgcggcaattaccttgatcatcgccacgttcgaacaaatgagttgtttcggcgaagag
aatgcagaacctgtgcgcaatcagtgcgctttatatgccagcaagttattacgaaaacct
gatcaatgcagaggagtcgctacttgctcgcatatattttggtcgggaaaatctttggct
acaggtggaaaagaaatgcaagagggtggtaaagtgttagattgtttgaagaaaggtatt
agaatagcaagccaatgcatggatacgtcggtgcaagtccagttatatgtggaattgtta
aaccattatatttatttttacgaaaaaggaaatacagctgtaactgtgcaaatattgaac
caagtaattgcaaaaattcgagaagagcttcccaatttggaagcaagcgaagaaaccgat
caaatacagaaacatttagcaaacacattagaacatctaagaaatagaatggaatcgccg
gattctgacggtcttagttatcaaggccttgttctttaa
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