Pseudomyrmex gracilis (graceful twig ant): 109855438
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Entry
109855438 CDS
T05003
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgc03036
]
109855438
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109855438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109855438
NCBI-ProteinID:
XP_020285278
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MATKKYDDGVSDDTSGSDFDDEEDPDKIEVPGGGKDLATAAGIGSIKDEKPADLLENPPD
KMQGALSVLNQKFGNKIPGGLVTKSAAPGYEMVRVGGSQGPPPGGFVNANQLNQLNQQMP
PGGYGGFPPGLASLAGFNPAAFLQSIGLSGMDMNALMGSFMGMPGMNMGVNPFMQLLNQS
GLHPNWAGLSGKNVSQMWMNANDPTKLMQSNMQEEEEVDDDEMGVAETYADYMPTKLKLG
RKHPDPVVETASLSSVEPTDVWYKVSIPEETIRSGALSALQLESITYASQQHEHLLPDGT
RAGFLIGDGAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLKDIGASKIEV
HALNKFKYAKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLLQWCGEDFDGL
IIFDECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKSRVVYASATGASEPRNMAYMVRLG
MWGEGTTFPEFNDFITAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSK
DFTKIYDHSVRLWVEAMQKFQEAAELIDAENRMKKTMWGQFWSSHQRFFKYLCIAAKVKH
AVSVAREAVKCGKCVVIGLQSTGEARTLEQLERDDGELTDFVSTAKGVLQTLVEKHFPAP
DRNRIQRLLGLEPPKFNLDGDDDMDGAGGSAGGSKRKPVRQAAQRASKKVRAWSSEEEVF
SEEDKNGAHSSGSEYKISGSESEDDQHSDEESNASSDFNPFFSDSDSDADPWDRRKKKGK
KPKKPAKKRLSTQDKIQSMLEHKQSGNRNKRNGDTANSGSIGAASGGAARNQAPPRDAIE
RACSMKEELLSQIEDLGERLPPNTLDQLIDELGGPENVAEMTGRKGRVVQTEDGAIQYES
RSEVDVPLETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPW
SADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDRRATET
RDLSQFNIDNKYGRAALEATMKTIMGYEPPLVPPPQDYHGDFFKDVADALVGVGLICNSE
NTPGVLTLDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIIAQAKKTGRFDMGILD
LGASGENVRRVRLYRFLRKHATGKAPTELHVVHVERGMSWAEATEKCSELTGSKEGFYLS
HQIRNGKQTAILAVIVDSGKKKTESKKDQLYMVYRPNTGLQLRQETLGELEKKYKKVSAD
EAQPHWSQQYEASVDTCSHAYWSGNCKNATIGIDCEVGLRRRSYNVLSGSVLSVWSRVEN
ILAARSGHNSKMQVVRLRTAEELKIVGTLIPKSCMEALRQALSSDAENTEELTF
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaaaaatatgatgatggagtaagtgatgacactagcgggagtgactttgac
gatgaggaagatcccgataaaatcgaagttcctggaggaggcaaagatctcgcaactgcc
gccggaattgggagcatcaaggatgaaaagcctgcagatttgctagaaaatcctccggac
aaaatgcaaggagcattaagtgtattgaatcaaaaatttggcaacaaaattcctggagga
ttagtaacaaagtccgcggcgccgggctacgaaatggtgcgcgtcggaggttctcaaggt
cctccgccaggtggttttgtcaatgcgaatcaattgaatcaactgaatcagcagatgcca
cctggtggatacggtggtttcccgcctggattagcttccctcgccggattcaatcccgct
gcttttcttcaatcaataggtctttcgggtatggatatgaatgctctgatgggaagcttt
atgggtatgcccggaatgaacatgggagttaatccttttatgcagctgctcaatcaaagc
ggtcttcatcctaactgggcaggtctgtcaggaaaaaatgtgtcgcaaatgtggatgaat
gcgaatgacccgacgaaactaatgcaatcgaatatgcaagaagaggaggaggtcgacgac
gatgaaatgggtgttgccgagacttacgccgattacatgccaaccaaactcaagctcgga
cggaagcatcctgatccggttgttgaaacggcatcattgtcgagcgtcgagccaacggat
gtctggtacaaggtgtccataccggaggaaacaatacgatctggcgcgttgtccgcgctc
cagctcgaatccattacgtatgcctctcaacaacacgagcacttgctgcccgacggtacg
cgcgccggatttctgatcggcgacggcgcgggtgtcggcaaaggcagaactatagctggt
ataatattcgagaattatctaaaaggacgaaaacgtgccatctgggtgtcggtgtcgaac
gacttgaaatacgacgccgagcgtgatctgaaagacataggtgcatccaaaatcgaagta
cacgcgttgaataagtttaagtacgctaagatctcatcagctgtgaacggcaatgtgaag
aagggagtaatttttagcacgtattcggcactgattggcgaatcgtcgcaaagcggcgga
aaatacaaaagccgattgaaacagttgctgcagtggtgcggggaagacttcgatggttta
atcatttttgacgagtgccatcgagccaaaaatttgtgtcccactggcagttcaaaacct
acaaaaacaggtttaactgttctggaactgcagaacaaacttccgaaatctagagttgtg
tatgccagtgcaaccggtgcttccgaacctcgcaacatggcttacatggtgcgactgggt
atgtggggcgagggaacgactttcccagagttcaatgattttatcaccgccgtggaaaaa
cgcggtgtaggtgcaatggaaatcgtggctatggacatgaagttgcgcggtatgtatatc
gctcggcagttgagttttcatggtgttgccttcaagatcgaggaagtacctctttcgaag
gactttacgaagatctacgatcactcggtgcgtctgtgggtcgaagcgatgcaaaagttc
caagaagcggccgaattgatagacgcggagaatcgaatgaaaaaaaccatgtggggacaa
ttctggtcgtcgcatcagcgtttcttcaaatatctctgtatcgccgcgaaggtgaagcac
gcggtgtccgtggctcgcgaggcggttaaatgcggcaaatgcgtggtgatcggtttgcag
tcgaccggcgaggcgcgtactttggaacagttggaacgtgacgacggcgaactcaccgat
ttcgtttcaaccgcaaaaggcgttttgcaaacattggtggaaaaacactttccggccccg
gatcgtaatcgtattcagcgtcttcttggtttagaaccgccaaagttcaacttggacggc
gacgatgatatggacggtgctggcggttctgctggaggcagtaagagaaaaccggtgcgt
caggcggcgcaacgtgcgtcgaaaaaagtgcgcgcatggtcgtcggaagaggaggtgttc
tcggaggaggacaagaacggggctcacagttcgggatctgaatacaagatcagcggcagc
gaaagtgaagacgatcaacactccgacgaagagagcaatgccagttcggatttcaatccg
ttcttcagtgacagtgattctgacgctgatccctgggacaggcgaaagaaaaaaggcaag
aaaccaaaaaaacccgcgaagaagcgtttgagcacgcaggataagattcagtcgatgctg
gaacacaaacagtccggtaacagaaataagcgcaatggtgatacagctaatagcggatct
ataggcgccgcgagcggcggtgcggcccgtaatcaggcaccgcccagggacgctatcgaa
agagcttgcagcatgaaagaggaattgttgtcgcaaatagaggatcttggcgaacggttg
ccgccaaataccttggatcaattgatcgacgagctcggcggtccggagaatgtcgctgag
atgacaggtagaaagggtcgcgtagtgcaaacagaagacggtgcaatacagtacgagtcc
cgttcagaggtcgatgttcctttagaaactcttaatttaacggagaaacagaggtttatg
gacggcgagaagaccgtagctatcatctccgaggcggctagcagcggtatatcgttacag
agcgatagacgagcaaggaatcaaatgcgacgtgtgcatatcacgctcgagttgccatgg
agcgcggacagagcgatacagcaatttggacgcacgcatcgatcgaatcaggtgaacgcg
ccggaatatatatttcttatatcggatctggccggtgagaggcggttcgcttcgatcgtc
gcgaaacgtctggagagtctgggcgcgttgacgcacggtgatcgacgcgcgacggagact
cgagatctgtcgcagttcaatatcgacaacaagtacggtcgcgctgcgttggaagctaca
atgaagactatcatgggatacgaaccgccgttggtgccaccgcctcaggattatcacggc
gatttcttcaaggatgtggcggacgcgcttgtgggcgttggtttgatttgcaacagcgag
aacacgcctggcgtgctcacgctcgacaaggactacaataacatgtcgaagttcctaaat
cgtattctcggcatgccggtagatttgcagaatcgtttgttcaagtacttcaccgacacg
cttaacgcgatcatcgcgcaggctaagaaaaccggccgtttcgacatgggtattctcgat
ctcggtgcatcgggcgagaacgttcgcagagtgcgactttatcgatttctgcgaaagcac
gcgacgggcaaggccccgactgagttgcacgtggttcacgttgagcgtggcatgagttgg
gccgaggcaacggagaaatgttcggaactgactggctcgaaagaaggtttctacttgagc
catcagatccgcaacggcaaacaaaccgccatcctagcggtgatagtcgatagcggtaag
aagaaaaccgagagtaagaaggatcagctttatatggtgtacaggcccaatacgggacta
cagctgagacaagagaccttaggcgaattagagaagaaatataagaaggtaagcgcggac
gaagcgcagccgcactggtcgcagcagtacgaagcttccgttgacacgtgttcgcacgct
tactggagcggcaactgcaaaaacgcgactatcggtattgattgcgaggtgggtctgaga
agacgttcctacaatgtattatccggttcggtgctgagtgtttggagccgcgtggaaaat
atactcgccgcacgatccggacataactccaagatgcaagttgtacgactgcgaacggct
gaagaactgaagatcgtcggaacgcttatcccaaagtcttgtatggaagcgttgcgtcaa
gcgctttcttccgatgctgagaacacggaggaactcacgttttga
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