Pseudomyrmex gracilis (graceful twig ant): 109855565
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Entry
109855565 CDS
T05003
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109855565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109855565
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109855565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Nucleoporin_FG
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
109855565
NCBI-ProteinID:
XP_020285570
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MSAKRSATTDLNHDNWNEEHEPEEVGTFVKASNDVLEKRVFKTARRRLPQSNDEGATKSA
FGTFTGFKTTPVTNTSPFSFLANTSTSTSTSALMTSSYTGSKNIATNGASKISKTDKDKD
DDIVDVEVISSTSTSKKPPTKEEENEKTKTHSSSYYAKLKGLNESVASWIKVHVDKNPYC
ILTPIFRDYEKYLKEITSKEESAKPQTPHASELAAQTATNDDKKDTNKNKPDSSPFGNSL
ANIKTAVSTPAADFKPPEKSIFSNVASTKSIFGNSEQQKFVFGSSTDNTTEKNKSIFGNT
ESNVASKNIFGNANVESNPFLNKPSVSEDKKPDEEEGKPKTKPVAPTFPISTFSFGQSST
NNVTAGFSFGGAKPFTFAPQSVKSEVQDSEDKGESENKDDDDEEPPKPDFKPVTEEGAIY
EQRCKVFVKKDGNYSDRGVGMLYLKPTPNGKMQLIVRADTSLGNLLLNTLLTSSIPTKLM
NKNTIMLVCLPLPDSTPPPVPVLLRVKTSEAADELLETLNKHKK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctaaaagatcagcaacaacagatttgaatcatgacaactggaacgaagaacat
gaaccagaggaagtgggcacatttgtaaaagcatctaatgatgtacttgagaaaagagtc
tttaaaacagccagacgtcggttgccacaaagtaatgatgaaggagccactaagagtgca
tttggaacatttacaggtttcaaaactactcctgtaacaaatacgtctccatttagtttt
ctagctaatacgagcaccagcacgagtacttctgcactaatgaccagttcgtacacaggc
agtaagaatattgcaaccaatggtgcttctaagatctcgaaaactgacaaagacaaagat
gatgatattgttgatgtagaagtaatatcgagcacaagtacaagcaaaaaaccaccgaca
aaagaggaagaaaatgaaaaaacaaagactcactcttcgagttattacgcaaaactgaaa
ggactgaatgaaagtgtagcctcatggataaaggttcacgtagataagaatccgtattgc
atattaactccgatatttagagattacgagaaatatttgaaggagatcacgtcaaaagag
gaaagcgctaaacctcagaccccgcatgcttcggaactcgcagcacaaaccgcgacaaac
gacgacaagaaagatacgaacaaaaacaaacctgacagttctccgttcggtaactcgctc
gccaatataaagactgctgtttcaaccccagcagcggatttcaaaccgccggagaaatca
atattctccaatgttgcgagtaccaaatcaatatttggtaattcagaacaacaaaagttt
gtatttggcagtagtacagataatactactgagaaaaataaatctattttcggaaacaca
gaatcgaacgtcgctagtaaaaatatttttggcaacgcaaatgtggaaagtaatccattt
ttaaacaaaccttctgtttcggaggacaaaaaaccggacgaggaggaagggaagcctaaa
acaaagccggtagctcccacctttccgatttccactttcagctttggacagagttccacc
aacaatgtgactgctggatttagttttggaggtgcgaagccattcacatttgctcctcaa
tcggtcaaatcagaggtacaagattccgaggacaaaggggagagtgaaaacaaagatgat
gacgatgaagaaccgccgaaacctgacttcaagccggtaactgaagaaggtgctatttac
gaacaaagatgtaaggtctttgtgaagaaagatggcaattatagcgatagaggtgtcggg
atgttgtatttgaaaccgactccgaacggaaagatgcaattaatagtacgcgccgacact
tctctgggtaacttattactcaacacgttgttgacttcaagcattccaactaagcttatg
aataagaacacgataatgttggtctgcctgccgttgcccgattcaacgccgccgccagtt
ccagtgttgttgagagtgaaaactagtgaggctgcggacgaactacttgaaacattgaat
aaacataaaaaataa
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