Pseudomyrmex gracilis (graceful twig ant): 109855643
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Entry
109855643 CDS
T05003
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109855643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgc03009
]
109855643
Ribosome biogenesis [BR:
pgc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109855643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_EIPR1
Svf1_C
Motif
Other DBs
NCBI-GeneID:
109855643
NCBI-ProteinID:
XP_020285698
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MASFKKVNTKVFARVGPELSEDNIYWKQYTAPVLLKEFGPIDYIDFSPVEPHYFAVTCSV
RVQVYNPITKLVTKTYSRFKEAAYGSCFRRDGKLLCAGGEEAVVRLFNISSNSMLRLFSG
HKAAVHRVFFTADDLHIASFSDDKSVVLWDIPSEKQLTSFNEHSDYIRAGAVSPVSTDVL
ISGGYDKIVHMYDSRTNKKILSVNHDAPVESLLFLPTGGIFLSAGGTDIKVWDALAGGKL
LAKITQHHKTVTCLKIASNGHRILSGSLDRHVKIYDAGSYKTLHTLDYSNAVLSVGISAG
DETIVAGMVDGLVSVRRREEDAKDAIKPRRKKMSYRHAGENLHVRSVDMVVQQEVKEIMS
KHDECLRKFQYSKALDCVMMNYVVNKTPHVTVALTQELIRREGLRRALAGRDGKSLVNII
KFLNKYIGSIRFGRVLVHVANVLLDVYEDHLDELSEEPRKMMAILAEKLQEEEQLIVALT
QLQGSMQMLLSSAETVPSSAVNENYTLEPSNAAQTDRDLVLSIA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtttaagaaagtaaacacaaaggtgtttgccagagttgggccggaattatcg
gaagacaacatatactggaagcaatatacggctccagttttgcttaaggaatttggtcca
atagattacattgacttttcaccagtagaaccacattacttcgctgttacttgctcggta
agagtgcaagtatataatccgatcacaaagctggtgacaaaaacgtacagcaggtttaaa
gaggctgcgtatggaagttgctttcgcagagatggcaaactgctgtgtgccgggggagag
gaagcggtggtcagactcttcaacatcagctcgaacagcatgttacggcttttttccggt
cacaaggctgcggttcacagagtcttctttacagccgacgatcttcacatcgcttcgttc
tccgatgacaaaagcgtcgtattgtgggacatacctagcgagaaacaattgacgagcttt
aacgagcacagtgattacatcagagctggcgctgtgagtcctgtgtccactgacgtgttg
atatccggtggatatgacaaaatcgtacacatgtacgacagtagaacgaataaaaagata
cttagcgttaatcacgatgcaccggtggaaagtttgctcttcttgcccactggtggaata
ttcttgtccgcaggcggaactgacatcaaagtctgggacgctctcgcgggtggcaaatta
ctggcaaaaatcactcaacatcataaaacggtcacatgtttgaaaatcgcatccaacggt
cacaggatattatccggctcgttggacagacatgtgaaaatttacgacgccgggtcttac
aaaacgcttcacaccttagattattctaacgcagttctgagcgtaggaattagtgctggc
gacgagaccatcgtggccggtatggtggacggtctggtttcggttcggcgacgtgaggaa
gacgcgaaagatgcgataaagccaagacgtaagaagatgtcgtacagacatgcgggtgag
aatctgcacgttcggagcgtcgacatggtcgtgcagcaggaggtaaaggagataatgagc
aaacacgacgagtgtctgcgaaaattccagtacagcaaagcgttggactgcgtgatgatg
aattacgtggtaaacaaaacgccgcatgtcactgtcgcactcacgcaggagctcatcagg
cgggaaggcctgagacgagccttggccggtagagacggcaaatcgctagtgaatataatc
aaatttctgaacaaatacattggcagcatacgtttcggaagagtgttggtgcacgtagca
aatgttttattagatgtgtacgaggatcatttggacgaactgtcggaagaaccgcggaaa
atgatggcgatattggcggaaaaattacaagaagaggaacagttaattgtggccctgacg
cagctgcagggctcgatgcagatgctactctcgagcgccgaaacggttccgtcgtccgcc
gtaaatgagaattataccttagaaccatcgaacgccgcgcaaactgatcgtgatctggtt
ctaagtatagcataa
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