Pseudomyrmex gracilis (graceful twig ant): 109855914
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Entry
109855914 CDS
T05003
Name
(RefSeq) cyclin-T isoform X1
KO
K15188
cyclin T
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109855914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109855914
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
109855914
Brd4/P-TEFb complex
109855914
7SK RNP complex
109855914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
109855914
NCBI-ProteinID:
XP_020286213
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MASDERWYFTKEQLANTPSRRSGLDADKELSYRQQAANFIQDMGQRLVVSQLCINTAIVY
MHRFYMFHSLNQFPRNSIAIAALFLAAKVEEQPRKLEHVIKMAHLCLFRDQGPPDSRSDQ
YLEHAQDLVFNENVLLQTLGFDVAIDHPHTHVVRCCQLVKASKELAQTSYFMASNSLHLT
TMCLQYKPTVVACFCIHLACKWSNWEIPQSTEGKQWFWYVDRTVTAELLQELTDEFLHIF
DKCPSRLKKKIMSISANQSPSIHHSSLPNSPFDAEPRKIQSPIDGSGASTSSGYSSRSHH
SQQEKQDRQEDKKAMAIAGPSTSRTAVDYHREYREKKERERLEREKASTMSTSHIDLNKS
HHSHHHKPMSNTTNVPNKHQVPSSVQKSSTSLHHNHYMKMGPVPQRHSTGSQPREATNRQ
RLPRDHNVSAGSIAHSSHVNANLDSSLPSESSSHRTDGNVVQDSTTSLHGRSQEKLSNNN
HSGHRLNVLDSKHQTSSHDKRLYRGEDPRLKSGKYPDISKIENSARRKPDERCEEVRQRC
EEVRKLIEKPPPKQADVPYLINTAPQKQQVHPSKYSNQQQPEKSQSSSLPGDSKHGTMSI
SQNMLSQDKSPNVSVPHTLLPHKSVKQIYNQPNTVSLSVPKDTIKNGSSQSCLPSLSNID
DSKLEKRPRTTAYEDSVEKNSADAQQNAILHTPPSKHRSLFSPETPTMKEPHPQSSKPKS
KQKTPPISATKTISQFVSSPTSQDSLKRSCPSDNVTSMHKRLRASNNSESEQPKKKIEDI
SNMEAMKMLGRVPDMIQPIRDNILLSSNGKNSNNSMTSVINDMKPPELIKPFEEHSRFNT
QYKTSLINMNMLTNGMDMNTAMRQEAPEHRVKKEYQEHYMKKDQSGQKTVEPSHSHFQPK
LEYSSPMKSAQSISALLQEPLAPMPSLLQSLQQQHSQVPLQQMHQEQQSIHHSVTDHQLP
MVTQCLSIPTESDNLTPIASTVDISALSCVPIIQQSSRTNEPESTTQGASEPTTSIIPTE
EKRSEHHKSEKKKKKEKHKHKDKEKSKEKHKHKHKDKDKERHREKKDKDKSDEVPTAAPI
KITIPKDKLNLSTETSPISGNVSVTSDKNITPQSTGLKIKIPKERLKGTDSVPSSSPAPL
SVVPLKFKIRTTDGIYRSSAAAPTSLPALPPPTSSSSLLLPTSSSSSLILPSSSSSMSSS
NGSMHATESTNETPSRKRERIDLIGDNSTTVAKKQMMISATGYGQGYRPGERQNGRHYNS
GNNKVRGRGGRQHYGRGPPLHPVAATQYGNAGGPYNYRGGRGGRNYQAPLYRGDGGYARG
VGNADNQPTESYFCANYSQYNTPAGYSMYDTISQQYYQQLSQQQSQYPVYPAGNNMPGLI
MITPDGAINTSVPPPSLYQNYRNPNRSGVSVLQMEIPVSKPASPPPLPNGPPPPPPPPPP
TTPE
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacgaaagatggtattttacgaaggaacagttagcgaatacaccgagcaga
agatccggcttggatgcggacaaagagctgagctatcgtcagcaggcggcgaattttatt
caggacatgggacaacgactagtcgtgtcacaactatgtatcaatacagccatagtctac
atgcacagattctacatgttccattcgttgaatcaatttcccaggaattccattgcgata
gcagcacttttcttagctgcaaaagtagaagagcaaccaagaaaattggaacatgttatc
aaaatggcacatctctgtctctttcgagaccagggcccgcctgacagtcgctcggatcaa
tatctcgaacacgcccaagacttagtgttcaatgaaaatgttcttctgcagacgctagga
tttgatgttgctattgatcacccacatactcatgttgttaggtgctgccaattggttaaa
gcatctaaagaattggctcaaacttcatactttatggcatctaacagtttacatctcact
actatgtgcttacaatataaacccacagttgttgcgtgcttttgtatacatcttgcatgc
aaatggtccaattgggaaattccacaaagtacagaaggaaaacagtggttttggtacgtg
gacagaaccgtaactgcagaactacttcaagaactcacagatgaatttcttcacatattc
gacaaatgcccgtcaagattaaagaagaaaatcatgagtatttccgccaatcaaagccct
agtattcatcattctagtttgccgaattctcctttcgatgccgaaccgcgtaaaatacaa
tcaccaatagacgggtctggagctagtacttctagtggctattcaagtcgttctcatcat
tcgcaacaagaaaaacaagataggcaagaagataagaaagccatggccattgcgggtcca
tcaacatcgaggacagctgtagattatcaccgagaataccgcgaaaagaaagaacgagaa
cgtttggaaagagagaaagcgtcaacaatgagcacttcgcacattgatcttaacaagtct
catcattcgcatcatcacaaacctatgtccaacacaacgaatgtgccgaacaaacatcaa
gtaccgtcgtcggtccaaaagagcagtacaagccttcatcataatcattatatgaaaatg
ggtccagtgccacagagacattctaccggtagtcaacccagagaagctaccaacaggcaa
cgattgccgagggatcacaacgtcagtgccggtagtattgcgcattcgtcgcacgttaac
gccaatttagatagttccttgccatccgaatcctcgtctcatcggacggacggcaatgtt
gtacaggattcgacaacctcattgcacggaagatcgcaggagaagttgagcaataataat
catagtggacatagactgaacgtgcttgacagtaaacatcagacatcgtcgcacgataaa
aggctgtaccgaggagaagacccaaggctcaagtcaggcaaatatccggatatcagtaaa
atcgagaactccgcacgacgaaagccggatgaaagatgcgaggaggtgagacagagatgc
gaagaagtgcgaaagctaatcgaaaaaccgccaccaaaacaagcggatgtgccgtatctg
ataaatacggcgccgcagaagcagcaagtgcatccttctaaatacagcaatcagcaacaa
cccgaaaaatcgcaaagtagctcgcttccaggcgactcaaaacatggaacaatgtcaatt
agccagaacatgctttcgcaagacaaatcaccaaatgtatcggtacctcatacccttttg
ccgcacaaatccgttaaacaaatatataatcaacccaacaccgtgagtttgtctgtaccg
aaggacacaatcaagaacggtagttctcagtcgtgtttgccctcgttgagcaacatagac
gattcgaaattggaaaaacggccacgaacgaccgcgtacgaggactccgtcgagaagaat
tctgctgacgctcaacagaacgcaattctccatacacctcccagcaaacacagatcgctc
ttcagtccagaaacaccgactatgaaggaaccacatccacaaagttcaaaacccaaatca
aagcaaaagacgccacctatctcagccacgaagacgatatcgcagttcgtcagttctccg
acttcgcaggattccctgaagcgatcatgccccagtgataatgtaacatccatgcacaag
agacttcgcgcatcaaacaacagcgagagcgaacaaccgaagaaaaaaatcgaagatata
tctaacatggaagcgatgaagatgcttggacgcgtgcccgatatgattcaaccgatacgc
gataatatattattgtcatcgaacggcaaaaacagtaataacagcatgacgtctgtcatc
aatgacatgaagccaccggagctcataaaaccattcgaggaacattctcgtttcaatacg
cagtacaaaacctcgttgataaacatgaatatgctgactaacggtatggatatgaatact
gcaatgaggcaagaagctccggaacatcgcgtgaaaaaagagtatcaggaacattacatg
aagaaggatcagtcggggcaaaagactgtggaaccgtcgcattcacatttccagccgaag
cttgaatattcgtcgccgatgaaatctgcgcaaagtataagcgcgctgcttcaagaacca
ctggcaccgatgccgtcgttattgcaaagtttacaacagcagcacagtcaagtgcctctt
cagcaaatgcatcaagaacaacagtcgattcatcactcggtgacggatcatcagctacca
atggtgactcagtgcttgtccatacctactgaaagcgacaatctcacaccaatagcctcg
accgtcgacattagtgctctctcctgcgtgccaataatacagcaaagtagtagaactaac
gaaccggaatcgacgacgcaaggtgcctcagaacctaccacgtctattatcccgactgaa
gaaaaacgatctgaacatcataaaagcgaaaagaagaagaagaaggagaaacataagcac
aaagacaaagagaagagcaaagaaaagcacaaacataaacacaaagataaagacaaggag
agacatcgcgagaagaaggacaaagataagagcgatgaagtaccaacggcggctcctatc
aaaatcacgattcccaaagacaagttaaatttgagtactgaaacgtcacctataagcggt
aatgtctctgtcacgtcggacaagaatataacgccgcagagtacgggtttgaaaattaaa
attccgaaagagcggctcaagggcactgatagtgtaccaagttcgtcgccagcgccactt
tcggtggtgccgctcaagtttaagatacggacgactgatggcatctacagaagttcagca
gcagcaccaacttcgttaccagcattaccaccgccgacatcatcgtcatcgttattgttg
ccaacatcatcgtcgtcatcgttaatattgccgtcttcatcatcgtcaatgtcatcgtca
aatggctccatgcacgctactgaatctacaaatgaaacgccaagtcgaaagcgtgaacgg
atcgatttgattggcgacaattcgacgaccgtagccaagaagcagatgatgatatctgcg
acaggttacggacagggctaccgacctggagaacggcagaacggcagacattataactcc
ggcaacaataaggtacgtggtagaggcggccgtcagcactacggtcgcggtccgccacta
catccagtagctgccactcagtacggtaatgccggtggtccctacaattaccgtggcggc
cgcggcggccgcaattaccaagccccactctatcgcggagacggcggttacgcgagaggt
gtcggcaacgcggacaaccaacctacggagtcttatttttgcgcgaattactcacaatat
aacacacccgctgggtactccatgtatgataccatatctcaacaatactatcaacaatta
tctcaacaacaatctcagtatccagtgtacccggcgggaaataacatgcctggtttaata
atgataacgccagacggcgcaattaacacgtcggtgccgccgccgtcgttgtatcaaaat
tatcgaaatccaaatcggtctggtgtgtccgttctgcaaatggaaattccggtatccaaa
cccgcatcaccacctcctctgccgaacggaccaccacccccgcctcctccgcctcccccc
acgactccggaataa
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