Pseudomyrmex gracilis (graceful twig ant): 109856011
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Entry
109856011 CDS
T05003
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109856011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgc03009
]
109856011
Ribosome biogenesis [BR:
pgc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109856011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40
Beta-prop_WDR3_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_Vps41
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR41
Beta-prop_Aladin
RAB3GAP2_N
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
109856011
NCBI-ProteinID:
XP_020286389
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MAPYRIHNIRFYNLEPKSVTCLSHEPKTEKLALARSDNTIEIWNVRCAPFVECTIAGHAE
NSVESILWIGTRLFSTGLDGAVVEYDLTTLGIKYEITVIGGAAWCMDVNHENTYLAVGTE
DGYINIFSVQQDKLIHNRIFDKQIGRILCIKWDNTGEMIYTGSPDTIRVWNVVSGHAIHK
MVTTRTKVRKATIIWCLAVTDDNVIISGDSQGFLCFWDPHMGVLIESHESHTADILSVTL
SYEKNMVYCAGVDPVVRSFSKVVLKSSGKSQWVKGIERRLHIHDVRALVEANGKLYSAGV
DGYLAVSSYPPKNLVKYPPLLQSPYATICPKSRCILLRYTNYLELWRLGTITKDPPELIG
NSMLHQLDEEPIKLLQLKTKGDESIISYAINKNSKTIAYSTDTHIRVFNFDVVEGDAQLT
LRNDTDLSMNRIQKMLFSTNGKLFATINNDGKENTVTLFKVYKLSLNLIGSFQTTKESIR
NVSLVCFSPDNRYLVLADRESIIATYFIGEGITPESIKAWKLPKYSCPPTAMAVQKDTLN
LVIVYSDHKIVEYNIPNRQYTEFSKNFLSRLPKQWWARPFPVTNILFDPSNENIIIMQDD
SSIYVINKTGEVPEKEAKIPKRENGEVTEDSNSLSSSQSQFAFQIVKKYKHLVYLNWLNN
EELVAIEVNPTSLSEKLPPTLKQKVFGI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtatcgcatacacaatatcagattttataatcttgaaccaaaatccgtgact
tgtttaagtcatgaaccgaaaacggaaaaattggctcttgcgagaagcgacaatactatt
gaaatctggaacgtcagatgtgctccgtttgttgagtgcactatcgctggtcacgccgaa
aactcggtggaaagcatactctggatcggtaccagactgttttcgactggtctcgatggt
gctgtggtagagtatgatttaacaacattaggaatcaagtatgaaatcactgtaatagga
ggtgcagcctggtgcatggatgtaaatcatgagaacacgtatttggctgtgggcacagaa
gatggatatattaacattttttctgtgcaacaagataaattaattcacaatagaatattt
gacaaacaaattggaagaattttgtgtattaaatgggataatacaggcgaaatgatttat
accggttccccagatactatcagagtatggaatgttgtatctggacacgcaatacataaa
atggttactacaagaactaaagttagaaaagccacgataatttggtgccttgctgtcacc
gatgacaatgtaatcatatctggcgactctcaggggtttctgtgcttctgggatccacat
atgggagtactgatcgaatcccatgagagtcatacagccgatatattatccgttaccttg
tcatatgaaaagaatatggtgtattgtgcgggtgtggacccggttgtaagaagtttcagc
aaggtagttctaaaatcaagcggtaagtcgcaatgggtaaaaggaatcgaaagaagattg
catattcatgatgtcagagctctggtggaagcgaacggaaagctttattcagctggagta
gacggatatctagcggtatcgtcttatccacccaaaaatctagtaaaatatcctccgtta
cttcaatcgccttacgccacaatttgtccaaaatctcgatgtatattgttacggtacacc
aattatctggaattgtggagactcggtacaatcacgaaagatcctccagaattaataggc
aattctatgctgcatcagttggatgaagaacccataaaattacttcagttaaagacgaag
ggtgacgaaagcatcatctcctacgcaatcaacaagaactccaaaacaatcgcgtactca
actgacactcacattagagtctttaattttgatgtggtagaaggagacgctcaactgacg
ctcagaaacgataccgatttatccatgaaccgaatacagaagatgctgttcagcacaaac
ggcaagttattcgccactatcaacaacgacggaaaagagaacactgtgacgctgttcaag
gtctacaaattgagtttgaacttgatcggctcgttccagacgacaaaagaatccatcaga
aacgtcagtctcgtgtgtttctctccagacaacagatatcttgtactcgcggatcgggag
tccataattgctacgtattttattggagaaggtatcacaccggaatcgatcaaagcatgg
aaattacccaaatacagttgtccgccgacagctatggccgtgcaaaaggacacgctaaat
ctcgtcatagtgtattccgatcataagattgtcgaatataacataccaaatagacagtac
acagaattttccaagaatttcctaagtcggctgccgaaacaatggtgggcacgtccgttc
ccggtaacaaacatcttattcgatcctagtaatgaaaacattataatcatgcaagacgat
tcaagtatatacgttatcaacaaaaccggcgaagtgccagaaaaggaagcaaagattccg
aaacgtgaaaatggagaagttacagaagacagcaactcactttcaagctcacaatctcag
ttcgcatttcaaattgtcaagaagtacaagcatcttgtctatttgaattggttgaataac
gaggagttggttgcaattgaggtgaatccaacctcattgtcggagaaattgccaccgacg
ctaaagcaaaaggtctttggtatataa
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