Pseudomyrmex gracilis (graceful twig ant): 109856056
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Entry
109856056 CDS
T05003
Name
(RefSeq) zinc finger BED domain-containing protein 1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109856056
04121 Ubiquitin system [BR:
pgc04121
]
109856056
Transcription factors [BR:
pgc03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109856056
Ubiquitin system [BR:
pgc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109856056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
ZBED1_RNase-like_helical
hAT-like_RNase-H
zf-C2H2-SPIN-DOC
ZBED1_RNase-like
DUF5774
Motif
Other DBs
NCBI-GeneID:
109856056
NCBI-ProteinID:
XP_020286492
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MENIKQAIMANGSSKLAGTSDDGKNDVQFTLAKMMDEKYTYTYKKLVVPPSMRSIYWKFF
GFPATDDGDILTKVKIVCILCKTQIAYNRNTSNLRMHLQNKHAQELLELESVSLGSRQVV
NQEHKERKTPHKRVLKTGLAPAKYIYTTNVDGTVQIDGDIQFVTDPNISLSNMEEDNIAI
AQPLRVMIKDGSGINGNNQNVAFLMSEDNVTSQSVDGKTVSDAIAEFIVMDLQLPEIVEG
RGFQRLVATLRSPCEIPSKNKLEEEIIPRIYDTFRESVASSLSLITLEVALTIEEWRSNN
EESFVTVSVYYQNMEEATLECKILSTLHAPLDWDRTQWENTLDSLLLEWDIKVDRITAVV
VSTSREELLMALSNRNLPVVPCLLHTLQVCAQTCFETPEVAHILSKCRAIIGVIISHPSA
YSALTLQERLIELEENAMLLDYAVIWISTYNMLEQMVLRRNILPSILDSIEGLDQEMFEI
TNDQWKVIEDLVTVLEPFKVTIMTLSEEKMPLISLLKPLLWQLVSSHLKVKDTDSETAKN
LKESLSDMLCERYADSNVTLLLQISTTLDPRFKALPYVTEEDKAVVSAPMKEMLTKLIQE
ESGDPGIKSEDETVPSKKSRLSVGMELLLGGLCSTKSGMSAEEKADLELVQYQSESPAPL
DYCPLQWWAKVSAKCPNLAKLANRYHCVPACCAPPTRITADMQIQYDTKRAALPPHLIDK
LLFLHGNHTMLG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggagaatattaagcaagcgataatggcaaacggctcgtccaagctggccggcacgtcg
gacgacggcaagaacgacgtgcagttcaccctcgcgaaaatgatggacgagaagtacaca
tatacgtataagaagctggtggtgccgccctcgatgagaagcatttactggaaattcttc
ggttttcccgccaccgacgacggcgatatactcaccaaagtcaagatagtttgtatactg
tgcaagacgcagatcgcttacaatcgcaacacgagcaatctacgcatgcatctgcagaac
aagcacgcacaggagctgctggagctcgaatcggtcagtctcggttccagacaggtcgtc
aatcaggaacacaaggagcgcaagactccccacaagagagtgctgaagaccggtctggct
ccggcgaagtacatttacacgaccaacgtggacggtacggttcagatagacggtgacata
caattcgtgaccgatccgaatataagcttgtcgaacatggaggaggacaatatcgcgatc
gcccaaccgctgcgagttatgatcaaagacggttccgggattaacggcaacaatcagaac
gtggcgttcctcatgtccgaggacaatgtgacaagtcagtcggtggacgggaaaacggtg
tcggacgctatcgcggaattcatcgtgatggatctccaattgccggagatcgtggaggga
cgtggatttcaaagactcgtggctactctgcgatcaccctgcgagatcccgagcaagaac
aaattggaggaggaaataataccgaggatatacgatacctttcgagaatcggtggcttcc
tcgttgtccctcatcactttggaagttgcgctcacgatcgaggagtggagatcaaacaac
gaagagagtttcgtcaccgtatcggtttattatcaaaacatggaagaggctacgttagag
tgcaaaattttgagtacccttcacgcgcccttagactgggacaggactcagtgggagaac
actttagattctctgttgctcgaatgggacattaaagtggacagaataacggcagtggtg
gttagcacatcgagggaagaattgcttatggcgcttagtaatcgaaatttgcctgttgtg
ccgtgcttgcttcacactctgcaagtgtgcgcgcaaacttgcttcgaaactcccgaagtc
gctcatatattgtcgaagtgcagagcaatcatcggagtcatcataagtcatccatccgcg
tattctgcgttgactctgcaagaacgattgatagagttggaggaaaatgcaatgttgctg
gattatgcagttatatggatatcaacctacaacatgttggagcaaatggttttgcgtcgt
aacatactcccatctatattagacagtatcgaaggattggatcaggagatgtttgaaatc
accaacgaccagtggaaagttattgaggatctcgtgacggttcttgaaccgttcaaagtc
accattatgacactgagcgaagaaaaaatgcctctgatatcattgttgaagccgttactt
tggcaacttgtttcctcacatctcaaagtaaaagatacggacagcgagactgccaaaaat
ctcaaggaatctctatcggatatgttgtgcgagcgatacgcggacagcaatgtcacactg
ttactgcagatctcgactactttggatcctagattcaaggcactgccgtacgttaccgag
gaggataaagctgtagtgagcgctcccatgaaggaaatgttgacgaagctaattcaggag
gaatccggagatccaggcataaagtccgaggacgaaacagtaccaagtaaaaaaagtaga
ttatcagtaggtatggaacttttacttggcggtctttgctcgacgaaaagcggaatgtct
gccgaggagaaggcggatctcgagcttgtccagtaccagtccgaatccccggcacctctg
gattattgtccgttgcaatggtgggccaaggtgtcggcgaagtgtccgaatctagcgaaa
ctggcgaacagatatcactgcgtgcccgcgtgttgcgcacccccgacacgcatcacggcg
gacatgcagattcagtacgacacgaagcgagcggctttaccacctcatctgatcgacaaa
ctgctgtttttacacggcaatcacaccatgctgggttga
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