Pseudomyrmex gracilis (graceful twig ant): 109856118
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Entry
109856118 CDS
T05003
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109856118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109856118
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109856118
mRNA degradation factors
5'-3' decay
Decapping complex
109856118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Sey1_3HB
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
109856118
NCBI-ProteinID:
XP_020286643
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MPERDVADDMIKTGEDRLAVHYPQTVQFNGQENQHSVEIYSTNVTIDPSPGDHDHGSSKV
KLKNIVDFTWEHHLYAGQLLAVHVSGKYLAYGIKVGTGGGVVRVVYKELEHRALLRGMRG
AIQDLAFAHVSNAILACIDCTGTLFIHTIEPTPSELLCSLVLQVDAEDISGINHRVIWCP
YIPEDDSSDGDEVSKLLVLTRGTKVELWSVTNASKYQSVDATDPALKEGGSMMEIDQHSG
MIVEAALSPDGTALATASADGQVKFFQVYLHSNSHNNQSQPRCLHQWRPHEGRPISCLFF
LDDHKNYLPDVQFWRFAVTGCDNNTELKVWSCEVWTCLQTIKFAPNPSTGKMPVLKAGLD
LSAGYLFLSDIYNKILYILSLSKDKSEAVACVSAISEFLLPYPILSFGIVDAAQRKIRST
GELLEDLCSMEEIDDNDEHLVINMFLVQPKSLQECHIAFKPASQNSRFMNILAQIAMDIN
DLPETETVNQNGIAKNCKEEHALSGTIETTINHSTGGLNLMTPDAFSSPAKKENTELEST
PESPEIVNNNRNRKVLSNSPSLAQAAQAFNVSDPPLIHSSSNEMEDQAPASNGSSPSREV
REILSLSKSDENEIDGKPETKTNTDRAEDWSNIPMVLLKDVHAMQESEEFPEDDENTVQR
EKTPDEPKATLPTDDNVLSWRLYNETNLEISNKLKSIMEVIQDQSEELKVLRAEVNRLQQ
ETPITTRIESAFARMAEQQNATLEQTLYNQMARQHEFLDNFETMIKDKIESTLPRTVEDT
VKPLKQQMRLDANQMDELFQKNITELISSVNVKDTLALTAANAAKPALDAAFKETFSTYF
LPSMEKVCQVMFQQIQDAFFNGTREYLQSVETIVEKQHQRRYEQLSESLSALVREELQTE
LNRALTRLQDNTIRTVRDSIRENLSQQFTEMSTARSRATTPAIPATTAADAQARVMSLLQ
RGQFNAAFQQALSASDLGLVVLVCEKTEPSRVFSCPNAQGQGTRCILQQPVILSLVQQLS
ADLGHRTELKHRWLEEAILNLDPNDPVTREHMGTVLMTLQNQLAAFVTNNPNHRSTRRMK
MLAMAARALLGQHP
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagagggacgtggccgacgacatgatcaagaccggggaggacagactggcagtt
cattatccgcagacagtgcagtttaatggacaagagaatcaacattcagtggaaatatat
agcacaaatgtaactatagatccttcccccggtgatcatgatcatggcagttcgaaagtg
aagttgaaaaacattgttgatttcacatgggaacatcatttgtacgccggccaattgttg
gccgttcatgtttctggaaaatacttagcttatggtataaaagttggtacaggtggtgga
gtagttcgtgttgtatacaaggaactagaacatagagctcttctgcgaggaatgcgtggt
gctattcaagatcttgcgttcgcccatgtttcaaatgcaattcttgcatgtattgattgt
acaggaacactttttatacacacaatcgaaccaacgccgtctgaattattatgtagttta
gtgttacaagtagatgccgaagatatttctggaattaatcaccgtgttatctggtgtccg
tacatcccagaagacgattcttccgacggtgacgaggtatcaaaactgttggttttgact
cgtggtaccaaggtcgaattgtggtcggtcacgaacgcgtcgaaatatcaatcagtagat
gcaacagatccagctctcaaggaaggcggaagtatgatggaaatcgaccagcattcagga
atgattgtggaggcagcgcttagtccagatggtactgcattagctacagccagtgcagat
ggacaagttaagttcttccaggtgtacttgcacagtaattctcacaataatcaatcacag
ccgcgttgtttacatcagtggagacctcatgaagggcggcctatttcttgcttgtttttc
ctcgacgatcacaaaaattatctacccgatgtccagttttggaggtttgctgtgacagga
tgtgacaataatacagaattgaaagtatggtcctgcgaagtgtggacttgtttacaaaca
attaaatttgctccaaatccttccaccggcaaaatgccggtgttgaaagcgggattagat
cttagcgccggatatctctttttgtcagacatatataacaaaattttatatatattaagt
ctttcaaaagataaaagtgaagcggtagcttgtgtgagcgcaatatcggaatttctcttg
ccgtatccaattttgagtttcggaatcgtcgacgccgcccaacgtaaaatacgatcaacc
ggcgaattgctggaagatctgtgttcaatggaagagatcgatgataacgatgaacatctt
gtcattaacatgtttctagtccaaccgaagtcgttgcaggagtgtcacattgcatttaaa
cctgcttcgcaaaacagccgtttcatgaacatacttgcacaaattgcgatggatattaac
gatttaccagagacagaaactgttaatcagaacggcattgctaagaattgcaaagaggaa
cacgctttatctggcacaattgagacaacgatcaatcacagtaccggcggtttgaacttg
atgacacccgacgcgttcagctcgcccgcgaagaaagagaataccgaattggaatccact
cccgaaagtccggaaatagtaaacaataatagaaatagaaaagttttatccaacagtcct
tctcttgcgcaagcagcgcaagctttcaacgtatctgatcctccgctcattcattcatca
tcaaacgagatggaagatcaggctcctgccagtaacggcagcagcccgtccagagaggtg
agagaaattttgtctctttcaaaatcagacgagaacgaaatcgacggcaagccggaaacg
aagacgaataccgatcgagccgaggattggtctaacatcccaatggttttactcaaggac
gtgcacgcgatgcaagaatcggaggaatttcccgaagacgatgagaataccgtacaaaga
gagaaaacaccggatgaaccgaaagcaactcttccgaccgatgacaatgtactatcttgg
cgtttgtacaacgagactaatctcgaaataagcaacaaattgaaatctattatggaagta
attcaagatcaaagtgaggagttgaaagtgttgcgcgcggaggtgaatagattacagcaa
gaaacgccaataaccacgcgaatagaatccgctttcgcgagaatggccgagcagcagaat
gcaaccttggaacaaactttatacaatcaaatggctcgacaacatgaattcttagacaac
ttcgagacgatgatcaaagataagattgaaagcactttaccacgtacagttgaggatacg
gtgaagcctctgaagcaacaaatgagattagatgcgaatcaaatggacgaactcttccaa
aaaaatataaccgaattaataagtagtgtaaatgtaaaagatactttagctttgacagct
gcaaacgcagcaaagccagcactagatgctgcattcaaagaaacgttctccacctacttc
ctgcctagtatggaaaaggtttgtcaagttatgttccagcaaattcaagatgcttttttc
aatggtactcgcgagtatttgcaaagtgtcgagaccattgttgaaaaacaacatcagcgt
cgttacgaacaattgagcgaatcgttatcggcattagtacgcgaagaactacaaactgaa
ctgaacagagctctgaccagattgcaagataacaccatacgcacagttcgcgattctata
cgagaaaatctcagccaacaatttacggaaatgtctaccgcgcgatcaagagctacgaca
cccgctataccggcaactactgcagctgacgctcaggcacgtgtgatgtctcttcttcaa
cgaggccaattcaacgcagctttccaacaagctctgagcgcgagcgatttaggcttagta
gtgctagtatgtgagaaaacagaaccttccagagtattttcatgcccaaacgcgcaagga
caaggtacaagatgcatcttgcagcaacccgtgatcctttcgcttgttcaacagttatcc
gctgatttaggacatcgtacggaattgaaacacaggtggctggaggaagcaatactaaat
ttagatcctaacgatcctgtgacgcgagaacatatgggcacagtgttaatgactttacaa
aatcaattagctgcgtttgtaacaaataatccgaatcatcggtcgacgcgccgaatgaaa
atgctcgctatggctgcacgtgcgttgctgggtcagcatccttga
DBGET
integrated database retrieval system
