Pseudomyrmex gracilis (graceful twig ant): 109856178
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Entry
109856178 CDS
T05003
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03020
RNA polymerase
pgc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109856178
09124 Replication and repair
03420 Nucleotide excision repair
109856178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109856178
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109856178
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109856178
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109856178
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109856178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109856178
NCBI-ProteinID:
XP_020286752
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MSIFDGEDNQYENENAQEISSKLWQEACWILINAYFDEKGLVRQQLDSFDEFIEMSVQRI
VEDSPQIDLQAEAQHTTGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNL
TYSAPLYVDITKTIVKDGKDGEDRVETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELN
ECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTL
WINMMAKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDP
EMMEMVKPSLDEAFVIQEQNVALNFIGTRGAKPGVTKEKRIKYAREILQKEMLPHVGISD
FCETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEV
RLYAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTF
ASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVG
SQPSPILEFLEEWSMENLEEIVPSAITDATKIFVNGCWVGIHRDPDQLMATLRKLRRQMD
IIVSEVSMIRDIRDREIRIYTDAGRISRPLLIVEGQNLLLKKRHIDMLKERDYNDGWQEL
VGSGVVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAG
INSIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKEAESKKIGDQEEQFEKPSRL
TCQGMRNAIYDKLDDDGIIAPGIRVSGDDVIIGKTITLPETDDELDSTTKRFTKRDASTF
LRNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMP
FTCEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLL
QEYGYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPM
EGRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTF
ECKGCKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMIH
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatttgacggggaggataatcaatatgagaatgaaaatgcacaagaaatttca
tccaaattatggcaagaagcttgttggattcttatcaatgcatactttgatgaaaaagga
cttgtacgacagcaattggatagttttgatgaattcattgaaatgtctgttcaacgtata
gttgaagattctccgcaaattgacttacaagcagaagcgcaacataccacaggcgaaata
gaaaatcctgtgagacatctattgaaatttgagcagatttatttatctaaaccgactcat
tgggaaaaggatggcgcaccatcccctatgatgcctaatgaagccagattgagaaatttg
acatattctgctccactatacgtcgatatcaccaagacgatagtaaaagatggtaaagat
ggagaagatcgcgttgaaacgcaacatcagaaaacatttattggcaaaataccaattatg
ttgaggtcaaaatattgcttgcttgctggcttatctgatcgtgatttaacagaattaaat
gagtgcccgttagatcctggcggatatttcattataaatggatctgaaaaggttcttata
gcacaagagaaaatggcaacaaatactgtttatgtgttcagcatgaaagatggtaaatat
gcatataaggcagaaatcagatcctgtttggaacatagctctcgtcctacttcaacctta
tggattaatatgatggccaagagcggagctagtatcaagaagtcagccataggtcaacgc
ataattgctattatcccttacatcaaacaagaaatacccattatgattgttttccgagct
cttggatttgtggctgatcgtgacattcttgaacacataatttacgatttcgacgatcct
gaaatgatggaaatggtcaagccgtctttggacgaagcttttgttatacaagaacagaat
gtcgctctaaattttattggcaccagaggtgctaaaccaggcgtgaccaaagaaaagcga
atcaaatacgccagagaaattttacaaaaagaaatgctgccgcatgttggcataagcgat
ttttgcgagaccaaaaaagcttattttcttggttacatggtacacagattactatcggca
tctctgggacgaagagaattggatgatcgggatcattatggtaataagcgactggacctt
gccggacctctgctagcgttcttgtttcgcggcttgttcaaaaatttaatgaaagaggta
cgtttgtacgcgcagaaatttatagatcgaggaaaagactttaatctcgagctagctatc
aaaaccaaaattattaccgatggcctgagatattcgcttgctacgggcaattggggcgat
cagaagaaagcacatcaagcaagagcaggcgtgtcgcaagtattgaacagattaactttt
gcgtcaacattgtcgcacctgaggcgagtaaattctccgattggaagagacggtaaactt
gccaaaccacgacagttacacaacacattgtggggtatgctgtgtccagctgaaactcct
gagggtgctgctgtgggattggtaaaaaatttagctctgatggcttatataagcgttgga
tcgcagccatcacccattctcgaattcttggaagaatggtctatggagaatctcgaagaa
atagtaccgagcgccattacagacgctactaaaatatttgtaaatggttgctgggtcggt
attcatagagatccggatcagttaatggcaactttgcgcaaattgagaaggcagatggat
atcattgtgtcagaagtatcgatgattcgcgatatcagagatcgcgaaataagaatatac
acggacgctggtagaatcagcagacctttgctcatagtggaaggacaaaatctgttactt
aaaaagagacatattgatatgctgaaagaaagagattacaacgacgggtggcaagagttg
gtaggtagcggagtggtagaatacatagatacactggaggaagaaacagttatgatagct
atgtcaccggaagatcttagacaagaaaaagaatatgcatattgtacgacttacacacat
tgcgaaattcacccagccatgattttaggcgtgtgcgcttccattattccgtttcccgat
cataatcagagtcctagaaatacttatcagagcgctatgggtaaacaagccatgggtgta
tacattacaaattttcacgtgcgcatggacactttggctcacgtactgtattatcctcac
aaaccgttagtcaccacacggtccatggaatatcttagattccgtgaattaccagcgggt
ataaacagtatcgtcgcaattctgtgttatacgggatacaatcaggaagatagtgttatt
ttaaacgcgagtgcagttgaaagaggctttttcagatcggtgttttaccggtcttacaaa
gaagccgaatcgaaaaagatcggcgatcaggaagaacagtttgagaaaccttcacgtttg
acttgtcaagggatgcgtaacgcgatatacgacaaactggacgatgacgggattatcgct
cctggaattcgagtatccggcgacgatgtgatcataggaaaaacgatcactctgccagaa
acggatgatgagctggatagtacaacaaaacgttttacgaaacgtgacgcatcgactttc
ttgcgaaacagtgaaactggtatagttgatcaagtgatgctgactttgaatagcgaagga
tacaaattttgcaaaatccgcgtgcgcagtgtacgcattccacaaattggcgataaattt
gcgtctcgtcacggtcaaaaaggtacatgcggaattcagtacaggcaagaagatatgccg
ttcacttgcgaaggtcttacacctgatattattatcaatccccatgccattccttctcgt
atgactattggtcacttgatcgagtgtatacaaggaaaagtttctgccaacaaaggtgag
attggtgacgccactccgtttaacgatgctgtgaatgtgcaaaaaatttccacgctccta
caagaatacggttatcaattgcgaggaaacgaagtgatgtacaatggacatacaggacgt
aaaatcaatgcccaagtcttcttgggaccgacgtattaccaacgcttgaagcacatggta
gatgataagatccatagtagggcgagaggacctgtgcaaattttggtcagacaacctatg
gaaggtcgagctagagatggcggacttcgctttggagaaatggaacgagactgtcaaatt
tctcatggcgcggcgcaatttttgagagaacgtttattcgaagtatcagatccgtatcga
attcacatttgcaacttctgtggtttaattgccatagctaatttacgaaacaacacattt
gagtgcaaaggatgtaaaaacaaaactcaaatttcacaaatcagattgccgtatgcggcg
aagttacttttccaggaactaatggcaatgaatattgcacctagactcatgatacattaa
DBGET
integrated database retrieval system
