Pseudomyrmex gracilis (graceful twig ant): 109856307
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Entry
109856307 CDS
T05003
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109856307
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109856307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
TFIIA
Motif
Other DBs
NCBI-GeneID:
109856307
NCBI-ProteinID:
XP_020287020
LinkDB
All DBs
Position
Unknown
AA seq
2034 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTSLCGIKWRKLVWGEVTGGFGGTPLEDPVLSSFSRCL
AGDILCVWRRVAATPATSGPAAAASSAPGAGIFDLGIAPSPAPPPLSLTAAKELWIFWYG
EEPDLSGLVSPELIACESEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFV
QPYNGYEKHRCSSSHLSFSFAFFVHGESTVCASVDVRQHPAVRHLTKTCLQRTQTSQSGV
KVILAPYGLAGTLTGQVSRMESQLLEEWKHFYPISTGINSENGLPSLVEVLVGGVRMRYP
SCYVLVTDMDDTPPETPLSPPSSPVTYERPLLTQQELSAATELPERVWAECTLSSPMSAF
KTESSTEHGTWTFVEPTQKSSCTCSKNLLRNNREDAFTNGQDVKYIGCRLHTTPGGWKSL
ASSQVQRERVDKGGRRVVPFHRRSTTQWDACPSVPANAPRSVLNRIEAPGTPPGGPPSYS
RGPPTGGDCLPVPSVGSPGSPAPSPLLTPHSEPASVPPAEPTMPTLSPQPPPSHTNTAPL
PLTPSQGPKSISSACNNQVHSPSIPGPILKRPILTSREYEDALLEDEQPLSWLYDYSLQE
AWLNHPVKRFKAANTINPSTNRNNTLYPPTNSQTLQVSKLEIKQEPVAVGECIGRSDPYE
FDATGEENGTNVDSLRRQRDDPSKPGSLFTSEGLQPSYKDLDQIFDNSDPDTSSDETNLN
QLQIQTPPGSNKSGGLHEETRIDSTSKNNSRGVTVLRPEELSKMFPTPPSLEHNPVASPC
QLNDPLMDQTELMMPVRPLRHLPDIYPNMGSPQEEPIDDWSYVFKPSVICKMVGSSKYAP
LTNLPSQSLPSITLPSHCVYRPSWQCNPASTNQDKSLPPTRPGSVQQQQQQQQQQQQQQQ
QQQQQQQQQQQQPCPSSPAPPYRSTTLPGRPPPPPPPPYDQPSPATSTTSSYLNKNLNSI
EADTPGPVRAPESNSLVVNILLGDTALNIFRDHNFDSCSLCVCNAGPKVVGNIKGADAGV
YLNNSWAGSALFQDDDPIRCSCGFSAVVNRRLAHRAGLFYEDEMEITGVAEDPAEKKKGS
LAAIACPGSKTVQEGLDTIPQNVLELLREQCMIVQSSASSLYRAARIRASTKSYPTLAPT
VNTLELNDSNEVCIAALDQGKIDSTHNDRAARVNGVHRWVFLKAQGPQCSGDIVRMMRSL
QPLLQDAVQKKCTTRMWEAPYTVAGPLTWRQFHRLAGRGTDDRCEPQPIPALVVGYDRDW
LSLSPYAICFWEKLSLEPFAGPRDVAYVVVAPDSDYIINKVKSFFRELSCTYEICRLGRH
TPISKQLRDGILRVGKSTVQKIAKQPMDDWFKLLGENQIGELLRLYAQVCNHRLAPYLTQ
VIQDRSLLDPGDSQSPNKQQQPQSTISVSETMPATPDVLTTKPESIEGENPRSDTPSSST
TSQTTTNTTGNSTPTSQTSTSTPITTGPDEEEVEPPAIVVYFVEPFSLGGTEDPDRRRLA
ILALLRAYSTAINSMPENMRSNIHVQIISLESILELGARERRKIQDEMRALALNVFLQGR
RLLNHNSTVKSLTGFGTAAAADLFLKSKDERNRAPYRLYAPAFVLAPLRAKSEAPDSFGM
ARPEECAVLYLSYCLSEDQSWLLAAATDDRGEIFETATINIDIPNRKRRKRASARRIGLQ
KLMDFILGVMSQGVQPWRLVVGRVGRIGHGELKGWSWLLSRKALLKASKHLKEICGQCSL
LYPSAAPCVLSACLVSLEPDSTLRLMADQFTPDERFSQASVNCQLSTPQDVTCTHILVFP
TSATTQSSQTAFQEQHNVPELGDDELFSALNDDMPEGMEGMGDFNDIFNVWPEPGAGGGQ
SPNGSPHRPEGSPHGGDGGGSGLGNHDGPGSPFPCSNTPRIAITEQAEEVGTLLQQPLAL
GYLVSTAPTGRMPPWFWAACPHLENVCPVFLKNALHLHSPAIQQNSDDLLQQQSAPTAHP
LDSQYTTDVLRYVLEGYNALSWLALDANTKDRLSCLPVHVQALMHLYHATAALV
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccatcgcatcaaaccaacggcgccagcctggaggactgccacacgaatttc
ttcgcattgacatccctctgtggtatcaaatggagaaaactcgtgtggggcgaggtgacc
ggcggtttcggtggcacgcccctcgaggatccggtgctgtcgagtttctcgcgatgttta
gctggtgatatattatgtgtgtggcgacgagtggccgctacaccggccacttctggtcca
gctgcagccgcctcttcggcgcccggggctggcatcttcgacctgggcatcgcaccctca
cccgcacctccgccactttcccttactgccgccaaagagctctggatcttctggtacggc
gaggaacccgatctctccggtctcgtatcaccggagttgatcgcttgcgaaagcgagcaa
ggttcttgggaaagcggattatcgtacgaatgccggtcacttcttttcaaggctctgcat
aacttgatcgaacggtgtttgctatcccgtgacttcgttcgcttaggaaagtggttcgtg
caaccttacaatggctatgaaaaacatcgttgcagcagtagccacttgtcattctcgttt
gcattctttgttcatggagaaagtacagtgtgcgcgagtgtggatgttaggcaacatcct
gcggtgcgacatctcacaaagacatgtctacaacgtacacagacctcccaatctggtgtt
aaagtgattctagccccttatggactagcgggcacattaaccggccaggtgagccgcatg
gagagccaacttcttgaagaatggaaacacttctatccgatcagtactggcattaattct
gagaatgggcttccatctctcgtggaggttctcgtcggtggtgtgcgcatgcgttatcct
tcttgttatgtcttagttacggatatggatgatacaccacccgaaactcctctctcaccg
ccgagcagtcccgttacttacgaacgacctctcttaacgcaacaggaactgagcgcagct
accgaattgccggaacgagtatgggcagaatgtactttgagctcaccaatgtctgctttt
aaaacagaatcttccaccgaacatggaacgtggacatttgtggaaccaacgcaaaagtct
tcctgtacctgttcaaagaatctattaagaaataatagagaagatgcattcacaaacgga
caagatgttaagtacatcggttgcaggttacatacgacccccgggggttggaagagcctg
gcctcctctcaggttcagagggagagagtagataaaggtggacggagggtcgtaccattt
caccgacgctctaccacccaatgggatgcttgtccctctgtccctgctaatgcccccagg
tcagtattgaatagaatagaagcacccggtacaccaccgggcggtccaccttcatattca
cgcggaccaccaacgggaggagattgtctacctgtaccatcggtcggctcgccgggttct
ccggcaccgtcacctcttttaactccacactcggagccagcatcagttccgcctgcagag
cctacgatgccgactctgagcccgcaacctccacccagtcacaccaacactgccccactg
cccctaactccgtcacaagggcccaaatctatttcttccgcgtgcaacaaccaggtgcac
agtccgtcaatacccggaccgatactcaaacggccgatcttgacatctagagaatatgag
gatgctcttttagaagatgagcaaccgttgtcttggctgtacgattattctcttcaggag
gcatggttgaatcatcccgttaaacgtttcaaagctgcaaatactattaatccatcaact
aaccgcaataacactctgtatccaccgaccaactctcaaacacttcaagtttccaagttg
gaaattaagcaagaacccgtcgcagttggtgaatgtatcggaagaagtgatccatacgag
tttgatgcgacgggtgaagaaaacggcacgaatgtcgacagtctcagacgacaaagagac
gatccatctaaaccgggatctctctttactagcgaaggtcttcaaccatcttacaaagat
ctagatcaaatatttgacaactccgatcctgatacttccagtgacgaaacaaatttgaat
caactgcaaatacagacaccaccaggttctaacaaatcaggtggattacatgaggaaacg
agaatagacagtacaagcaagaacaacagtcgtggagttacggttctgcggccagaggaa
ctttctaaaatgtttcctacaccgccctctttggaacataatccggtcgcttctccttgt
cagttgaacgatcctcttatggaccagactgagttgatgatgcccgtacgaccgttaaga
catcttcctgatatctatcccaacatgggctcgccacaagaagagccgatcgatgattgg
tcatacgtgttcaaaccatctgtcatctgcaagatggttggttcttccaaatacgctccc
ctcacaaatctgcctagccaatctctgccatccatcacactgccatcgcactgcgtatac
agaccttcctggcagtgcaatcctgcttccaccaatcaggacaaatctcttccaccaact
agacctggatccgtgcagcagcagcagcaacaacaacaacaacaacaacagcagcagcag
caacagcagcagcaacaacaacagcagcagcaacagccatgtccatcaagtccagcgcca
ccttatcgctcgacaactctccccggtaggccaccaccaccaccaccacctccgtatgat
cagccaagtccggctacttccaccacttcttcgtatctcaacaaaaatcttaacagtatc
gaagcggacacaccaggacctgttcgcgcacccgagtcaaattctctcgtagtgaatatt
ctcctcggtgacacggcgcttaatattttccgagatcacaatttcgacagttgcagtctg
tgcgtgtgtaacgccgggcctaaggttgtgggcaatattaagggtgccgacgcaggcgta
tatctcaacaattcatgggcaggttccgcgctttttcaagatgacgatccaatcagatgc
agttgcggttttagtgccgtagtgaatcgtcgacttgcacaccgagcaggtctgttttac
gaagacgagatggaaataacaggtgtcgccgaagatccggcggaaaagaaaaaaggatcg
cttgctgcaatcgcgtgtccgggatcaaaaacggttcaggaaggtctcgatacgataccg
cagaatgttctggagttgcttcgcgagcaatgtatgatcgttcaaagctcggccagcagt
ctgtatcgagcggccaggatacgtgctagcacgaaaagctatccgacacttgcgccgacg
gtaaacaccttggaacttaacgacagcaatgaagtatgtattgcggcgctcgatcaaggc
aagattgacagtacgcataacgaccgggctgcgcgcgttaacggtgtacatcgatgggtg
tttttgaaagcgcaaggacctcagtgcagcggtgatatcgtgcgaatgatgagatcgttg
caaccattactgcaggatgcggtacagaaaaagtgtacgacgcgcatgtgggaggcgccg
tatacggttgctggaccgcttacatggcggcaatttcatcgtttggctggtcgtggcact
gatgatcgctgtgaaccacaaccgatacccgctctagtcgttggatacgatcgtgattgg
ctgtcattgtcgccatacgcaatctgtttctgggaaaaactttcgctggaaccgtttgct
ggacctagagatgttgcgtacgtggtagttgcgcccgatagcgattatattataaataaa
gtcaaatcgttctttcgtgagctttcctgcacgtatgagatttgccgattaggaagacac
acgccaatttcaaagcagttgcgcgatggaatcttacgtgtcggtaaatcaaccgtacag
aaaatagcgaaacaaccaatggacgattggtttaagcttttaggagagaatcaaataggc
gagttgttgaggttatatgcccaagtgtgtaatcatcggttagctccatatctgacgcag
gtcatacaagatcgtagtttgttagatcccggtgattctcaatcacccaataagcagcaa
caaccgcaatccactatttccgtttccgaaacaatgccggctacacctgatgtattaacg
accaaacctgagtctatcgaaggggagaatccgaggagcgatactccctcctcaagcact
accagtcaaaccactaccaatacaactggtaattcaacaccgacttcacaaacgagtact
agcacgccgattaccacaggtccagatgaggaagaagttgaacctccagctatcgttgtc
tattttgtcgagcctttctcgttaggtggtaccgaggatcctgatcgtcggcggctcgct
atcttggctctactcagagcttactccactgcaatcaatagcatgcccgagaatatgaga
tcaaatattcatgtccagataatatcgttggagagcatattggagttaggagctcgagaa
aggcgaaagatacaagatgaaatgagagctttagctttgaacgtctttttgcaaggacga
cgactgttgaatcacaattccactgtaaaaagtctcaccggtttcggtaccgccgctgcc
gcggacctctttcttaagagtaaagatgaacggaaccgggcgccttaccggctctacgca
ccagccttcgtgctagcgccactacgagcgaagagcgaagctcccgattcattcggtatg
gcgaggcctgaagaatgcgcagtgctttacttgagctactgtttgagcgaggatcaatcg
tggctgttggcggccgcgaccgacgacaggggtgaaatctttgagacggctactattaac
attgacatacccaatcgaaagagaagaaaacgcgcatcagctaggcgtatcggtcttcag
aaactcatggactttatactaggcgttatgtctcagggtgtgcagccatggagattggtt
gtaggtcgtgtaggacgcatcgggcacggcgaattgaaaggatggagctggttactttct
agaaaagcacttttgaaagcatcaaagcatctgaaagaaatatgcggacagtgcagtctc
ttgtatccttcggcggcaccttgtgtactcagcgcatgtttagtctcgcttgagccggac
tctactctaagattaatggccgatcagtttactcctgacgagagatttagtcaggcatcc
gtaaactgccagttatccacaccgcaagatgtcacgtgcactcatatacttgtttttccc
acatccgctactactcagtcatcacagacagcatttcaagagcaacacaacgtacccgag
ttaggagatgacgaattgttctctgctctgaatgacgatatgccagaaggcatggaggga
atgggagattttaacgatatattcaacgtatggcctgaaccaggagcaggcggtggacaa
agcccgaacggaagtccacatcgtcctgaaggatcaccgcacggaggagatggcggtggt
tcaggtttaggcaatcacgatggtcctggtagtccctttccatgcagcaatacgccaaga
atagcgataaccgaacaagcagaagaagttggcacacttctacaacaaccgctcgctctt
ggttatctggtgtcaactgcgccaacgggaagaatgccaccgtggttttgggcagcttgt
cctcatcttgaaaacgtttgcccggtgtttttgaagaacgcattacatttgcatagccct
gcgatacagcagaacagtgacgatttacttcagcaacaaagcgcaccaaccgcacatccg
ttggattcgcagtacaccactgatgtgctcagatacgtattggaaggatacaacgcactg
tcgtggctcgcgttagatgcgaataccaaggaccgattgtcctgcttaccagtgcacgta
caggcgctcatgcatctctaccatgcaacggcagctctcgtctga
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integrated database retrieval system
