Pseudomyrmex gracilis (graceful twig ant): 109856469
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Entry
109856469 CDS
T05003
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109856469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgc04121
]
109856469
Enzymes [BR:
pgc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109856469
Ubiquitin system [BR:
pgc04121
]
Ubiquitin ligases (E3)
HECT type E3
109856469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF4667
DUF6707
Motif
Other DBs
NCBI-GeneID:
109856469
NCBI-ProteinID:
XP_020287368
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MYSFEGDYRRRPQQNLSGASRRDEKAVLLQHAQLERLKREQQRKKHNAALKLQACVRSFL
TRKLVYTQKREEFDEAQQAANRNLNLDELLSYLQKLLFFYNHSVDSKRLIWVLQHFLKHQ
KEIKFMSINSSQWLWRLRWILRMCMRYGNTESGGACNLAIPLRVLDVFTSWEKTEQGLRE
NNYRHLESIFDYLIRHSYFEQLRKLLDKKVPPMVEATPIPPTEISKCLLDMIKRPLDLIP
YQISYQRNVDQKESFSQLVLRELCRSMFSPRLTDSIRMFVVPALAEFRNFPYVQLIACIN
RLQLESTLNLTYCVLSLDSSNHFSLCESEDALVNYLQVLASLSSTIVPLMAQQSITEQQQ
NDSDSDNESNGSVTDQEQADILQHCIEMLNEQQRVNRLLLAVEQSRVDSSAVLQPLCRLC
HHLLITNKLAVHKYKLLYMLAFKPVFLKHLWTNLVAIRQVSLFGGNAAPSLLKIISRGLA
LSTEDANRIVPLLAVFCSLFSLLIATLHDTEFFLEHTEQTPDNQHQQQHAMPFTIAELAD
LSGQLKSVCLGLVELAFPDTRPTVRDDYKTAVLGSTSSTQFRHDTQIWTHLFKVTVGLLR
QLHTRDLRRQFCPEGHWIATNVVIPIDKPQDFAFRRRRLRGYVPFQNLRAFTREEFEEGP
PLSATEVRTLTLLREIPFVVPFNNRVMVFQSLIYKDKAEQQGELTHFMQGPSIQISVRRN
YLYEDAFDKLSPENEPELRLKMRVQLVNTVGLEEAGVDGGGLFREFLSELLKTSFDPNRG
FFKLTKDNMLYPNPSVHLLVDDFPKHYYFIGRILGKALYENLLVELPFAEFFLSKIVGRQ
SDVDVHHLASLDPIMYRNLLYLKSYKGDVADLGLDFTVLSDELGERRIDELKPSGANIPV
TNHNRIEYIHLMADYKLNKQIRAQCYAFKQGISSVVPLDWLQMFNNKELQVLISGAQIPV
DVNDLKLHTNYTGGYAPDHPTITAFWKVVNEFNDQQKSQLLKFVTSCSRPPLLGFKELDP
PFCIQHAGSVDRLPTSSTCMNLLKLPEFPDEKILREKLLYAIQAGAGFELS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtttcgaaggagattacagacgcaggccacagcagaatctgtctggtgccagc
agacgggacgaaaaagctgttttgttgcaacacgcgcagctggagaggctgaagagagaa
cagcaacgcaaaaagcacaatgccgcgttgaagttgcaggcgtgtgtacgctcatttctc
acaagaaagctagtttacacgcaaaagagagaggagttcgatgaggcccagcaagcggcc
aatagaaatctgaatctagatgaacttttgtcatatctgcaaaagttattgtttttttat
aatcattcagtggatagcaaaagactaatatgggtgctacagcattttctgaaacatcag
aaggagattaaattcatgtcaatcaattcctcacaatggttgtggagattacggtggatt
cttcgcatgtgtatgcgatacggcaacacggaatccggtggcgcgtgtaacttggccata
ccgttacgtgtactggatgtgttcacctcgtgggagaaaacggagcaggggttgcgcgag
aacaactatcgacacttggagagtatattcgactacctgatccggcacagctacttcgaa
cagcttagaaagttgcttgataagaaagttccaccaatggtggaggcaacgccgattccg
cctacagagatctcgaaatgtctgctcgacatgatcaaacggccgttagatttgattcct
taccaaatttcctatcaaagaaatgtagatcaaaaggaaagtttttcgcaactcgtgttg
cgcgagttgtgcaggagcatgttctcgcctagactgacggactcgatacgcatgttcgtt
gtgccggctttggcggaatttagaaactttccgtacgtccagctgatcgcctgcatcaat
cgacttcagctggagtctacgctaaatttgacgtactgcgttctatcgttggactcgtcc
aatcatttctcactatgtgaatctgaggacgcgttggtaaactacctgcaagtgctcgcg
tccctgagctcgactattgtgccactgatggcgcagcaaagtatcacggaacaacagcag
aatgacagcgactcggacaacgaatccaacggcagtgtgaccgatcaggaacaagccgac
attctgcagcactgcatagagatgctgaacgagcagcagcgtgtgaacagactgctcttg
gcggttgagcagagtcgagtggactcttccgcggtattgcaaccgctttgtcgcctgtgc
catcatctgctcataacgaacaagctggctgtgcacaagtacaaactgctctacatgctt
gctttcaaaccggtgtttctcaaacatctgtggacaaatctggtggcaattcgtcaggtg
tcgcttttcggcggcaacgccgctccgtcgctgttgaaaatcatatctcgaggacttgcc
ctatcgacggaggacgccaacagaatagtacctctattagcagtgttctgctcgctgttc
agtttgctgatcgccacgctgcacgacaccgaattcttcctcgagcatacggaacagacg
cccgacaaccagcatcagcaacagcacgctatgccgtttaccatcgcggaactggcggat
ctgtcaggtcaactgaagagcgtttgcctgggtctggtagagctcgcatttcccgacacg
cggccaaccgtgcgcgacgattacaagactgccgttctgggctcaacttcttccactcag
tttcgacacgatacgcagatctggacgcacttattcaaggtcacggtaggtcttttgcgt
cagctacacacgcgtgatctcaggcgacagttctgcccggaaggccattggatcgcgacc
aatgtcgtcattcctattgacaagccacaggacttcgcgtttcgacggcgcagactgcgc
gggtacgtgccctttcagaacctgcgagcgtttacaagagaggaattcgaggaaggaccg
ccgctctcggcaacggaagtgcgaacacttacgttgctgcgcgaaataccgtttgtcgtg
ccgttcaacaatcgcgtaatggtgttccagtcgttgatctacaaagacaaagcggagcag
caaggtgaacttacgcattttatgcagggcccgtcaatacagatttccgttaggcgaaac
tacctctacgaagacgctttcgacaaactttcgccggaaaacgaaccggaactgcgactg
aagatgcgcgtgcagctggtgaacactgtaggactggaggaagctggcgtggacggcggt
ggtctgtttcgggaatttctgtccgagctgttaaaaaccagttttgatcccaatcgcggt
ttcttcaagctcaccaaggacaacatgctgtatccgaatccttcggtgcacctgctggtc
gacgactttccgaagcattactatttcatcggtagaattctaggaaaagcactttatgaa
aatttattggtcgagctgccgttcgccgagttctttctgtcgaagatcgttggccgccaa
tccgacgtggacgtgcatcacttggcctctctcgatcccattatgtaccgcaatctgctg
tacctgaagagctacaagggcgacgtggcggatctcggactggacttcaccgtgctcagt
gacgagcttggcgagaggcggatcgacgagttgaaaccgagcggcgccaatattcccgtg
acgaatcacaatcgcatcgaatatattcacctgatggccgactataagctgaacaagcag
atccgcgcacaatgctacgcgttcaagcagggtattagcagtgtggttccgctcgattgg
ctgcagatgttcaacaacaaggagttgcaagtgctgatatcgggcgcgcagattcccgtg
gacgtgaacgatttgaaattgcacaccaactacaccggcggatacgcgcccgatcatcca
actattactgccttctggaaagtcgtcaatgagttcaacgatcaacagaagagccagctg
ctcaaattcgtcacgagttgcagtcgcccgcctctcttgggatttaaggaactagatccg
cctttttgtattcaacatgccggcagtgtggatcgtttgccaacttccagtacctgcatg
aacctgttaaaacttcccgagtttccggacgagaagattcttcgcgagaaacttttgtac
gcaatacaggctggcgcgggctttgaacttagttaa
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integrated database retrieval system
