Pseudomyrmex gracilis (graceful twig ant): 109856657
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Entry
109856657 CDS
T05003
Name
(RefSeq) putative ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109856657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109856657
03036 Chromosome and associated proteins [BR:
pgc03036
]
109856657
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109856657
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109856657
mRNA degradation factors
5'-3' decay
Decapping complex
109856657
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109856657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
Motif
Other DBs
NCBI-GeneID:
109856657
NCBI-ProteinID:
XP_020287768
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MKNVSGYGRQQHCARNVSNCWETKIFWRNGKESIQYIHYNSSKMMTETHMNSNHMLNSGL
SNKSEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEK
PSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPKKDVIQALVIVPTRELAL
QTSQICIELAKHMDIKVMVTTGGTNLRDDIMRIYQKVQVIIATPGRILDLMDKHVANMGE
CKILVLDEADKLLSQDFKGMLDHVISRLPPQRQILLYSATFPLTVKQFMEKHLRDPYEIN
LMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCNSTQRVELLAKKITDLGY
CCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQAVNVVINFDFPKMAETYL
HRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPKVIDPSLYVARPEDNNSM
EEGNVSK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgtatccgggtacggacggcagcaacattgtgcgcgcaacgtttcgaattgt
tgggaaactaaaattttctggcgcaacggaaaagaaagtatacagtatatacactataat
agttccaaaatgatgacagagacgcatatgaactctaatcacatgttaaattctggttta
tctaataaatcagaaatagacaaaatggatgatgtgggttggaaagccaaattaaaaatt
ccaccaaaagataaaaggatcaagacaagtgatgttactgacacgcgaggtaacgagttt
gaagaattttgcctaaaacgagaattattgatgggaatttttgaaaagggatgggagaag
ccatcaccgattcaagaagcaagtattcccattgcactttctggtaaagacatcttagcg
cgagcgaaaaatggaactggtaaaacaggagcttactctattccagtgttggaacaggtt
gacccaaaaaaagacgtaatccaagcactggtgattgtacctacaagagagttagcgtta
cagacatcacaaatttgtatcgagcttgcaaagcatatggatattaaagtgatggtcact
actggtggaaccaacttacgcgacgatattatgaggatttatcaaaaagtacaagtgata
atagcaacaccaggaaggattcttgatctaatggataagcatgtagcaaatatgggcgaa
tgcaaaattctagttttggacgaagcagacaaactgctgtcacaagacttcaagggaatg
ttagatcatgtaatatctagattgccaccacaacgtcagattctattgtattcagctaca
tttcctctaactgtgaaacaatttatggagaaacatttgagagatccatatgagattaat
ttaatggaagaattgactctgaagggcgtaacgcaatattacgcttttgtacaggaacga
caaaaagttcactgccttaacacgttattctccaagttgcaaataacgcaaagcataatc
ttctgcaattcgacacaacgtgttgaattactggctaagaaaataacagaccttgggtat
tgctgttattatatacacgcgaaaatggcgcaggcgcaccgcaatcgcgtattccatgat
ttccgtgcgggattatgccgaaatcttgtgagcagtgatctatttacacgtggtattgat
gttcaagctgtgaacgtcgtaatcaattttgactttccgaaaatggcagaaacatatctg
catcgaatcggtcgttctggtagattcggccatttaggtatagcaattaacctaatcacg
tacgaagatcgtttcaacctacatcgtatcgaacaggaacttggaacagaaataaaacct
atcccaaaggtgatagaccctagtttgtacgtagcaagaccagaagacaataatagtatg
gaagagggtaatgtgtccaagtag
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integrated database retrieval system
