Pseudomyrmex gracilis (graceful twig ant): 109856693
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Entry
109856693 CDS
T05003
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109856693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109856693
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109856693
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109856693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
109856693
NCBI-ProteinID:
XP_020287843
LinkDB
All DBs
Position
Unknown
AA seq
1701 aa
AA seq
DB search
MSSKYYRQRMTPKHHIAQQLLFSVFTANDIRNLSVTKIWTPLCFNILGHPLKGGLYDPSL
GPIRNSLELCVTCGCVGQKCPGHFGHIELPVPVVNPLFHKGLATLIKLACLNCFTFQIPS
YVKLLLSAKLKLLFEGHLNDVDSLDHEVSPLVSNQEFQKLEDQSEYICEVINIFMQNFYN
RCRQNTSQDCDNHTNVKNILATWHEYVENILKKYVRNNRAGVCMNCQQALPKLLVLQNKI
MITNKEVPNKEVISNEVVHKLETVMIMPDQSKEYLRKIWENEKDFLKIIMPCLESVEIEY
PTDILFFEVIPVPPPIARPVNVVKNQLLEHPQTMIYKTIIQDCLVLRNIVQTIQDGNTDN
LPEEGRLVFEQIRGTTAVEKLHNAWQALQINVNHLMDRDMNKTPESINCLGLKQILEKKE
GIIRMHMMGKRVNFAARSVITPDPDLNIDEIGVPEAFALKLTYPMPVTPWNVVELREYVM
NGPNVHPGAVMVENEDGSVQAINKINRYAIAKRLLTAFRTNDTFVGIKILHRHLQNGDML
LLNRQPTLHKPSIMAHKARVLKGEKTFHLHYANCKAYNADFDGDEMNAHFPQNEVARSEG
CNIAAVHNQYLVPKDGTPLSGLIQDYMVSGVRLTTRGKFFPRKIYMQLVYPALSSLEKKI
ILLPPAVIKPIPMWSGKQILSTIIINIIPANKARINLTSNTKINAREWQMQPPRIWKCGE
EFKNPLTMSEAEVIIRHGELLCGVLDKTHYGATPYGLIHCIYELYGGKYANKMLSAFGKL
FQTYLQYEGFTLGVEDILITRVIDKKRKKIVAKCRQIGENIQKSVTNMPDDASMDEVKAK
MEESYYSNPKFRAQVDNKYKSALDVYTNDINKMCLSAGLFKKFPDNNLQLMVQSGAKGST
VNTMQISCLLGQSELEGKRPPLMISGKSLSSFPAYDPTPRAGGFIDGRFMTGIKPQECFF
HCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLVINYDATVRDSDNSLIQFYYGEDGLDI
PGSRFLRKEQLPFLVDNKDAILDTELLKQLKPTKKEVTRIIKKIKKWENKNGSTLRKKRI
SEFSKFSEENINQYSNGKRKTIDQNNGRSKASISLMKKWIKASEEVKATFRALCERCPEP
VTSKYREDLEFGALPESIERLMDEYLSHSSQVKKSDLRDLLSVKFMNTFCPPGEPVGLLA
AQSIGEPSTQLTLNTFHFAGRGEMNVTLGIPRLREILMMASRNIKTPSMEIPFKNGLQNL
EKQAKKLRSKLTRCVLSDVLKDITINRIMKDNKSQRQLVFTLTIEYLPHKYYKREFSVHP
QDVIKRTEEIFFRNMFKEIAKIAKMTKVYLHFEEHKKRAKEDEDAALDEIDEDGETLPTT
NKTRMDLGEMHESSDEEDVAEDADATMVKSRSRHQENQEYEDPEEEEEEIQNEANDEEEN
DDNNNNNKNNKTSEEDRDDSDDENNIATPTKNKKSDNRKSSVLDMYDHAIDYEYDENKFS
WCKLTFWLPLKMIKLDLPTIIRNAANKTVLWETPCIKKGFTFQNNKGETIIKTDGLNIAE
MFKYDKTLDLNRLYSNDVYNISQTYGIEAAYRVIINEVRNVFKMYGITVDYRHLSLIADY
MTYDGTYKPLSRKGMESSASPLQQISFESSLTFLKSATLQGKKDDISSPSSRLMLGQPCK
SGTGAFSVMPLIDITLRYNKI
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaaatattacagacaacgtatgacaccaaaacatcacattgctcagcaattg
ttgttctcggtgtttacagcaaacgatataagaaatttaagtgtgacaaaaatctggaca
ccactgtgtttcaatattctaggacatcctttgaagggtggattgtacgatccatcttta
ggtccaataagaaacagcttggaactatgcgtcacatgtggatgcgttggtcagaaatgt
ccaggtcactttggacatatagaactgccagtaccggttgtcaatccgctgtttcacaaa
ggattggccacgctgatcaaactggcatgcttgaactgtttcacctttcaaataccatca
tatgttaaactgttactatccgccaaattaaaattgcttttcgaagggcacctcaatgat
gttgacagcctggatcatgaggtgtcacccttagtatcaaatcaggaattccagaagtta
gaagaccaatctgaatacatatgcgaagtaattaatattttcatgcagaacttttacaac
agatgcagacagaatacatctcaagattgtgacaatcataccaatgtaaaaaacatcctt
gcaacgtggcacgagtacgtcgagaatattctaaagaaatacgtcaggaacaatcgtgcc
ggagtatgcatgaattgtcaacaagctttgccgaaacttttggtgttacagaataaaata
atgataacaaataaggaagtgcctaacaaggaagtaatatccaacgaagtggtgcataaa
ttggagacagtgatgatcatgccagatcagtctaaggaatatctacggaaaatttgggaa
aacgaaaaagactttctaaagattattatgccctgcctggaatcggtggaaatcgaatat
cctaccgatatattatttttcgaggtgataccggtgccaccaccgatagcgcgaccggta
aacgttgtcaagaatcaattgctcgagcatccccagacaatgatctacaagactatcata
caggactgtctcgtattgaggaacattgtacaaacaattcaggacggtaacacggataat
ttgcccgaagaaggccggctcgttttcgaacagataagaggtactacggcagtagagaag
ctgcacaacgcctggcaggcgttgcagatcaacgtgaatcatctgatggatcgcgacatg
aacaagaccccggaatcgataaactgtctgggtctgaaacagattctcgagaagaaggaa
ggcatcattcgcatgcacatgatgggtaagagagtgaacttcgccgcgcgttcagtcatc
accccggatccggatttgaacatcgacgagatcggcgtccctgaggctttcgctctcaaa
ctaacgtaccctatgcccgtgacgccttggaacgtcgtcgaactgagagagtatgttatg
aacggacccaacgttcatcccggcgcggtcatggtggagaacgaggacggatcggtacag
gcgatcaacaaaatcaatcgctacgctattgcgaagcgtcttctgacggcgttcaggacc
aacgacacctttgtcggcattaagatactgcatcggcatcttcagaacggcgacatgttg
ctgcttaatcgacaaccgactttgcacaaacctagcatcatggctcacaaagcgcgcgtt
ctcaagggcgagaagacctttcatctgcattacgccaactgtaaagcgtacaacgcggat
tttgacggcgacgagatgaacgcgcactttccgcagaatgaagtggccagaagcgaaggt
tgcaacatagctgctgtgcataatcagtatctcgtaccgaaagacggaactccgttgagt
ggcttaatacaggattacatggtgtccggagtgcgtctgacaactcggggtaaatttttc
cccagaaaaatatacatgcaattggtttaccccgctctgtcatcattggaaaaaaaaata
attctcttgcctccggctgttatcaagccgataccgatgtggtcgggaaagcagattctc
tcgaccatcattatcaatattattcccgcgaataaagcgcgaatcaacctaacatccaac
acaaagatcaacgcgagggagtggcaaatgcagccgccacgaatctggaaatgcggagag
gaattcaaaaatcctctgaccatgtcggaagctgaagttataattcgacatggcgaattg
ttgtgcggagtgctcgataagactcattacggagcgactccttatggtcttattcactgt
atttacgagttatacgggggaaagtacgcgaacaaaatgttgagcgcgttcggcaaactg
ttccaaacgtacttgcagtacgaaggattcactctcggtgtcgaggacattttgataacg
cgcgtgatcgacaagaaacgcaagaagatcgtcgccaaatgcagacaaattggcgaaaat
atacaaaaatcggtaacgaacatgccggatgacgcgtctatggacgaagtgaaagccaaa
atggaagaatcttattacagcaatccaaagttccgcgcgcaggtcgataacaagtacaag
agcgcgctggacgtttatacgaacgacattaacaagatgtgtctgtcagcgggacttttc
aagaagtttccggacaacaacttgcaacttatggtgcaatccggcgcgaaaggatcaacc
gtaaacactatgcagatatcgtgtctgctcgggcagagcgaattggaaggcaaaagacct
ccgttaatgataagcggtaagagtttatcgagtttcccggcttacgatccgacacccaga
gcgggcggattcatcgacggcagatttatgactggcattaagccgcaggagtgtttcttc
cattgcatggcgggacgggaaggtttgatcgataccgctgtgaaaaccagtagatccggt
tacttgcaacgatgtcttgtgaagcatttagaaggtttggttatcaattacgacgcgacg
gtcagagattcggacaacagtttgatacaattctattacggagaagacggcttggacata
cccggctcgcgtttcttgcgaaaggaacaactgccgtttttggtcgacaacaaggacgct
attctggacacggagttactgaaacagctgaaacccaccaagaaagaagtaacgagaata
atcaaaaagatcaagaaatgggagaacaaaaacggatccactttacggaagaagagaata
agcgagttcagtaagttctcggaagaaaatatcaatcagtacagcaatgggaaaagaaaa
accatcgatcagaacaatggtagaagcaaggcctcgatatcgcttatgaagaagtggata
aaagcgagtgaggaagtgaaagcgacgtttcgcgcgctgtgcgaacgatgtcccgaaccg
gtgacttcgaagtacagagaggacttggaatttggcgctctaccggaaagtatagaacgt
ttgatggacgaatacctttctcattcgtcgcaggtaaagaaatcggatcttagagatctg
ttgtccgtgaaatttatgaacaccttctgtcctcccggtgaaccggtcggattattggcg
gcgcaatctataggcgagccgtctacgcagctaacgctcaacacctttcacttcgctgga
cgcggtgagatgaacgtgaccctgggtattcctagattacgtgagattctgatgatggcg
tcaagaaatataaagactccgagtatggaaatacccttcaaaaacggactgcaaaatttg
gagaaacaggcgaagaagctgagatcgaagttgacgaggtgcgttctgagcgacgtactg
aaggacattacgatcaataggataatgaaggataataaatctcaaagacaactagtgttc
accttaacaatcgagtatcttcctcacaagtactacaagagagagttctccgttcatccg
caagatgtgatcaaacgcaccgaggagatcttcttcagaaacatgttcaaggaaatcgcc
aaaatcgccaaaatgaccaaggtctacttgcacttcgaggaacataaaaaacgagcgaag
gaggacgaggacgcggctttagacgaaatcgatgaagacggcgagacgttaccgacaaca
aacaaaacgcgaatggatttgggggagatgcatgagtcatccgacgaggaggacgttgcg
gaagatgctgacgcgacaatggttaaatcgaggtcgcgtcatcaggagaatcaggagtac
gaagatccggaagaggaagaagaggaaatacaaaatgaagcaaatgatgaggaagagaat
gatgataataataataataataaaaacaataaaacctcagaagaagaccgagacgacagc
gatgatgaaaataatatcgcgacgcccacgaaaaacaaaaagtccgacaacagaaaaagt
agcgttttagatatgtacgaccatgccattgattacgagtacgacgaaaacaaattttca
tggtgcaagctcacattttggttaccgctcaaaatgatcaaattagacttgccaacgata
attcgaaacgctgccaacaaaactgtcttgtgggagaccccgtgcatcaagaaaggcttc
acttttcaaaacaataagggtgaaacaattatcaaaacggacggtttgaacatagcggaa
atgttcaagtacgataagacgctagacttgaacagattgtattcaaacgacgtatacaat
atttcccaaacgtacggcattgaagccgcgtacagagttataataaacgaagttcggaac
gttttcaaaatgtacggcatcaccgttgactacagacatctttctttaatcgcggattat
atgacatacgacggcacgtacaaaccgctcagtcgaaagggaatggagagttcggcctcg
ccgttgcagcaaataagcttcgaaagctccttgactttcttgaaaagcgccactttacag
ggaaaaaaagacgacatatcgtcaccttcgagcagactgatgctgggacaaccttgcaaa
tccggaactggagcattttctgtaatgccgttgatagatataacactcagatacaacaag
atataa
DBGET
integrated database retrieval system
