Pseudomyrmex gracilis (graceful twig ant): 109856910
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Entry
109856910 CDS
T05003
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109856910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109856910
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109856910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
109856910
NCBI-ProteinID:
XP_020288697
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MEVAPMGNLPCSKDLWSIISATTCCCAKETVEDEIKNGTVLLKEGLQFFKPYTDASLQNI
AKKDSPPLQQIYDLISKLAPLLNLDATITWNLVCNFVSYEYRNCAETFASQLCDHTSIKA
LIDDIWNFYYSERIFLIKCLKLMIEYKDDKKHPHHKQFTKFFNEVLMGNLLESIRKQIEA
LKFVNPPTRSQFCTEEHLHRLYNSTLVEIRELLHILTMIVYDVHIADDKFVQFYGSIAGE
PRRLASTKSHEDKEAITKKIEEIQYSQVALLLVALDVNKHTAMEDWISGVRSNMQEIFEQ
KCVRESLPQDGPLLLSWMLANYAIDPDNVDTLNRFKPFGVKAIQLDVFHYLRDLINCEMF
QEETHYAAVVQRTVYNLLVLLCEFVDQDRLSAFNGIFDAMAATVKFPECAARFWNERDEG
LWQIFAVAVQLYPYKFEPLTSIAIALASASVASAKKIALELDNLPSLTLEIPRQMDHSKS
FQPYEAECTIQKNSFIISCHCARENIVVLSNEREVILFHVRASYWDALHYKIEQLFSEAN
RGIDNVLTPEHVYQGLQLVNALLAKDIDIPSSMVAPTELSFEIVNRFSYLAALRPPPTTY
RCVVVCISISSKLVLRYPEEILSRMRSSVYPKFNKWYQEPMDYAKIISFEGGHIASWILE
IESIEHTYPVLRAFLDTLYNYLITKHSVEAMYAIEIPGMVYLLYTILPGLESWYFKSSAE
RIDLRLKTMFCIHRALDSSLPKDDFRNQLQCVVVYCLLYLEPRHALLKLLRTGERTLHNQ
MITETDWISGKGFKMAKSVELALSIVNRLLMFRKSLDLKSKVDRSPLEIALYSSPRSPNG
LLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAYRLTLP
TCALEVKVAILELVAVCLEKQPGLTEALFNIMHQAESKRIFPRPADEFLTEGCRQFLDSY
LERMYKEDDIVCDQLYESTMTVLRAMWYYKNEILVNFFRKRENFWSHLFAPLFKPLVRGT
KGYSQLLDVITLELYKSPLLETNFSKNLRELLDKSKDYWKKLAVYVLVVNGEGENNKEEH
SKQDKSIAEPLYELNLESWYHFIVILTDDRTAKNYSINVTQAQFLTQLALDSLLDRLKQL
QQQPDSTKCSNIGKIPMLLASLSLRCITSWKQMCVGDSRIFKARLSQLTQEIASFISSYH
AGKSLRETLISLLLGCLQLVKSTVAEDSASLEYLLAHSCVIAIYELEKLKEAFRRHHEIS
VDVKTDQKDTQKKTERFYNVETLRGIRESLPATLAICMVTQLLRSYLERNASVKHRLRIS
CMQLRQMIPELIACIGSTLQKYPYLKFSTAAMSLLGVISRSPYCPHLFNYHDIAKLWLNL
TPPADIQYSMLDSLYEYSVNGQWRCQDWWQLYTLGLEFLIGLVTSETHTVYAHHVESFLQ
FHEHQLMVVSTLLRHTADLLAADLIQSLVALIHAVATQTYIWNMIQPSVRETLIKCTYLA
YDSTVNLLLRPRILKFIIDGISMESAEELESCDNRLPSGELRLLVNKLIVINTTCALSFV
HFSPRLNTLMDTIYTQDYWYTPMAEMNFGPPQMSMSSGPQLTYGTIISSTQLFTQALHSR
LQPAASLPASSTPHSGREDKTDSAKKEWERAAPENLRRMHTSKDLRRIIHGASTRSSSNV
AGEFLGYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALATGRHVTKSSGSASAG
PGNSSPIIARNHRFSDPWFESMDENNTRLALEINLILTLSQVLEGMKSPRLASRDRQLIA
RETATELGIFFDFLEHRGTPDIWQVKGSLIDADTRSSRTIQDTSDPIQASLPARLKKNST
IDKAPVCLPDHEDSIDEIQTQEKRLEDSILTTGAFKTNVSSVQFLPLMGKLLKTVVESLD
SAQFR
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggctccaatgggcaacttgccttgcagcaaggatttatggtctataatatct
gccacaacatgttgttgcgccaaagaaactgtagaagatgagataaaaaatggaactgta
ttactcaaagaaggtcttcagttttttaagccttacacagatgcatcattgcaaaatatt
gctaagaaggactcacctcctcttcaacagatatatgatttgatcagtaaacttgctcca
cttcttaacttggatgctacaattacttggaatttggtgtgtaattttgtatcctacgaa
tacagaaattgcgctgaaacttttgcatcacagctttgtgatcatacttctataaaagcg
ttaatcgatgatatttggaacttttattattctgagagaatatttttgataaaatgtctc
aagctcatgattgaatataaagacgacaagaaacatccacatcacaagcaattcacaaaa
tttttcaatgaagttttgatgggaaatctgcttgagtctatacgaaagcaaatagaagca
ctgaagtttgtaaatccacctacgcgatcacaattttgtacagaggaacatttgcacaga
ttgtacaatagtactttggtagaaatacgcgagttgcttcacatactgaccatgatcgtg
tacgatgtacatattgctgatgacaagtttgtccaattctacggaagcattgcgggcgaa
cctagacgattagcaagtacaaaaagtcatgaagacaaggaagctattactaaaaaaatt
gaagagatacaatacagccaagtggcattgctacttgtagcattagacgtgaataaacac
actgctatggaagattggataagtggcgtcagaagcaatatgcaggaaatctttgaacag
aagtgcgttcgtgagagtttaccgcaagatgggccgttacttttgtcgtggatgttagca
aattacgcaattgatccggacaacgtagatacgttaaaccggtttaagccgttcggagtc
aaagctatacagctcgacgtatttcactatttgcgagatttaatcaactgcgaaatgttt
caagaagaaactcactacgccgcggtcgtgcaaagaaccgtttacaatctcctcgttctg
ttgtgcgaatttgttgatcaggatcgattgagcgcttttaacggtattttcgacgctatg
gctgctacagtcaagtttccggaatgcgcggctagattttggaacgagcgagatgaaggt
ctatggcagatttttgcggttgccgtacaattgtatccctacaagttcgagcctttaacc
agtatagctattgctctagcatccgcgagcgttgcgagtgctaagaagattgccttggag
ctggacaatctaccgtcgttaactttagaaattcctcgtcaaatggatcacagcaagtcg
tttcaaccgtacgaagcggaatgtacaatacaaaagaattcgtttattatatcctgccat
tgtgcgcgcgagaatatcgtcgtattgtcgaacgaacgagaagtgatcttgtttcatgta
agagcaagttactgggatgctttgcattataaaatagaacagttattttcggaggcgaac
agaggaattgacaacgtcttgactcctgagcacgtttatcagggtctgcaattggtgaat
gcgttgttggccaaagacatcgatataccatcgagtatggtcgctcctacggaattgagt
ttcgaaatcgttaatcgattttcatacttggcagcgttacgaccaccgccgactacgtac
agatgcgttgtcgtgtgcattagcatctcgtcaaaattggtcctgagatatcccgaggag
attctctcgcgaatgagatcgagtgtttatccgaagttcaacaagtggtatcaggagccc
atggattacgcaaaaataatctccttcgagggtggtcacatcgcatcatggattttagag
atagaaagcatcgagcacacttatcctgttctgcgcgcgtttttggacactttgtacaat
tatctgatcaccaagcacagcgtcgaagctatgtacgctatcgaaataccgggtatggtg
tatctgctgtacaccatattaccgggattggagtcgtggtatttcaagtcgagcgcggaa
agaatcgatttacgactgaagactatgttttgcatccatcgagctcttgattcgagtttg
cctaaggacgattttcgcaatcagttgcagtgtgtagtggtatactgtctgttatacttg
gagccgcgtcacgcgctactgaaattgcttcgaacgggcgagcgtacattgcacaatcaa
atgatcacggagaccgattggattagtggaaagggattcaagatggctaagagcgtagaa
ctggctctctcgatagtcaatcgattgttgatgttcagaaaatctttggatctgaaatct
aaagtagacagatcgccactcgagattgctctgtattcctctccaagatcacccaacgga
cttttaatagtgccgaccatcgttaattatctgtacgtctggtttagcccttcgctgcaa
aagatggcggtcagattgttgaagaaattcgcggaagagttttccatgtcattgctcgtc
tgcatgggaatggatggcacctccatacgagaaactttcgcgtatcgattgacgctgccg
acgtgtgcgctcgaagtaaaggtcgctattctagaactggtagctgtttgtctggagaaa
cagcccggtctaacggaagctctcttcaatattatgcatcaagcggaaagcaaaagaatt
ttcccacgtccggccgatgagtttcttacggaaggctgccggcaatttttggactcgtat
ttggaacgaatgtacaaggaggacgacattgtttgcgatcaattgtatgagagcacgatg
acggtgctgcgcgccatgtggtattacaaaaacgaaattctcgtcaatttctttcggaag
cgagagaatttctggagtcaccttttcgcgccgcttttcaagcctttggtgcgaggcaca
aaaggttattctcaattgttggatgtaattacgttggaactgtacaagagtccattgcta
gagactaatttctcgaaaaatttgagagagctcttggacaagtctaaagactattggaaa
aaactggctgtctacgtcctcgttgtaaacggagaaggcgaaaacaacaaggaagaacat
tcgaaacaggacaagtctatcgcggaaccgttatacgagcttaatttggaatcttggtac
cactttattgttatactcactgatgatcgaacggccaaaaattattcgattaacgtaacc
caagcgcagtttcttactcaattggccttggattctctgttggatcgattgaaacagctt
cagcaacaaccggattccactaaatgttcaaacatcggtaagattccgatgttgctcgcc
tctttgtctctaagatgtatcacttcttggaaacaaatgtgcgtgggcgactcgagaata
ttcaaagccagactgtcgcaactcactcaagaaatagcgtcctttatctcttcttatcac
gctggcaagtccttacgagaaacgctgatctcgttgctgctcggatgcctgcaactggtg
aaaagtacagtggccgaggattcagcgagtctcgaatatctcttagcgcactcttgcgta
atcgcaatctacgagttggagaaattgaaggaagcgtttcgtcgtcaccatgaaatctcc
gtcgatgtcaagaccgatcaaaaggatacgcaaaagaagacagagcgcttctacaatgtg
gaaacgcttcgtggtatacgggaaagtttaccggcgacgttagccatttgtatggtgacg
cagttgttacgatcgtatctcgagcggaatgcaagcgtgaaacatcgtttgagaatcagt
tgcatgcaacttcgtcaaatgatacccgagcttatagcgtgcattggttccacgttgcag
aaatatccgtacttgaaattcagtacggcggctatgagtttattgggtgttatatctcgt
tcgccgtattgtccgcatctttttaattatcacgacatcgcgaaactttggctcaactta
actcctccggcggacattcagtacagcatgctcgactcgctgtatgaatattcagtgaac
ggtcagtggcgttgccaggattggtggcagttgtacacattgggtttggagtttctgata
ggtctggtcaccagcgagacacacacagtgtacgctcatcatgtggagagcttcttacag
tttcacgaacatcagttaatggtcgtgtccacattactgagacataccgccgatttgctg
gctgccgatctgatacaatcgttggttgcccttatacacgccgtagctacgcaaacgtat
atttggaacatgatacagccgagcgttcgcgagactctcatcaagtgcacgtacttggcg
tatgacagcacggtgaatctgttgttgaggccgcgaatactcaaattcattatcgacggt
atcagtatggaaagcgccgaagagctcgaatcttgcgacaatcgattacccagtggtgag
ctgagattgttggtgaacaaactcatcgttataaacacgacatgcgcgttgagctttgtt
cacttctcgccaagattgaacaccctaatggacacgatatatactcaggattattggtac
acaccgatggctgagatgaacttcggacctccacagatgagcatgagctccggtccgcag
ctcacttacggcacgatcatcagctcgacccagctgttcactcaggctctgcattcgcgc
ttgcaacctgccgcttcattgcccgcgtcttcgaccccgcattccggacgagaagacaaa
accgattctgcgaagaaagagtgggaacgcgccgcgccagaaaatctcagacgcatgcac
acgagtaaagatttacgaagaattattcacggggcctcgaccaggtcgtcgtcaaacgta
gctggagaattcttgggatatgttagtggtctggacgtcactgtaccattactcagcagt
cctagacttgtacgccgaccgtatgatccgttgatatgcgaaaataccattttgtcaaga
gcgaccgctttggcaaccggccgacacgttacgaagagcagcgggagcgcatctgccggt
cccggcaacagtagcccgatcatagcgagaaatcacaggttcagcgatccgtggttcgaa
tccatggatgagaacaatacgcgactagcgttggaaatcaatctgatcctgacgttatcc
caggtattggaaggaatgaagagtcctagactcgcttcgcgagatcgtcaacttatagca
cgggagaccgctacggagctgggaatcttcttcgatttcctcgaacaccgcggcactccc
gatatctggcaggtgaaaggttctctgatagacgcggacacaagaagctccaggacgatt
caggatacgagcgatccgatacaagcaagtttaccagcaagacttaagaaaaatagtact
attgataaagcaccggtgtgtttgcccgatcatgaagattctatcgacgagattcagacg
caagagaaacgacttgaggacagtatcctcactactggagcatttaaaacaaacgttagc
agtgtacagtttttgccgttaatgggaaagttgctcaaaacagttgtcgaatcgttggat
tcggcacaattccgataa
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integrated database retrieval system
