Pseudomyrmex gracilis (graceful twig ant): 109857022
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Entry
109857022 CDS
T05003
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109857022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109857022
03036 Chromosome and associated proteins [BR:
pgc03036
]
109857022
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109857022
Coactivators
SAGA/TFTC/STAGA complex
109857022
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109857022
STAGA complex
109857022
TFTC complex
109857022
SAGA complex
109857022
SLIK complex
109857022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
CFAP251_N
Beta-prop_Aladin
NBCH_WD40
Beta-prop_TEP1_C
DSE1_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_SCAP
PAC11
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Tricorn_2nd
ASA1
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_NOL10_N
WD40_like
PEP5_VPS11_N
WD_LRWD1
Cytochrom_D1
Beta-prop_WDR35_TULP_N
DNAI3_WD
PM1805
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
109857022
NCBI-ProteinID:
XP_020288460
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MDNDKNTALAVLQFLKKYNLKGTEELFRKEANLTDISEDTQQTDSEVTSVLSAYKSEGDP
AQYEKAYSEMKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSQEAKQLAEKFNGNL
EEYYQDDFKKICNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKYSVLLN
IIQEHLYFDMYEGVARNKQQIDATSGAMVGEATRQDNKAKVCYGLLKEPDIQCVAPAEEE
EDDTGGGDGDKPKKKKAKKDPLFSKKTKTDPNAPAVGRMPLPNLKDADKLEKVKALREAS
KRVILGPDSLPSICFYTLLNSIHSVTAAEIAEDSSLLAIGFSDSGIKVWSLIPQKLRLMK
TGEQLQDIDREADDVLVRMMDDRTAETARNLFGHSGPIYSLSFSPDRNLLLSSSEDATIR
LWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFATASNDKTARLWATDSHQPLRIFAGHYS
DVDVVQFHPNSNYVATGSSDQTVRLWDCVSGSQVRLMTGHKGSIYSLAFSTEGRFLASAG
ADHRVLVWDLAHGHLVAALSDHTGNIHCLSFSRDGNILVSGSLDCTLKLWDFTKLAEEMS
LEDVNVSHNPDVKTNAESYLLRTFATKNSPVIALHFSRRNLLLGIGMFDST
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggataacgacaaaaatacggcgctcgctgttttacagtttctaaaaaagtataattta
aaaggaactgaagaactgttcagaaaagaggctaatctcacagatatttctgaggatact
caacaaaccgattctgaagtaaccagtgttctttctgcttacaaaagcgagggtgatccc
gcgcaatatgaaaaagcatacagtgaaatgaaaaaatttgtggaaggtgccttagatatt
tataaacatgaattgggtaccatattatatccagttctggtgcatatgtacctagagtta
gtgtataataatcattctcaagaagcgaaacaacttgcggaaaaattcaatggaaattta
gaagaatattatcaagatgattttaaaaaaatatgtaatgtgacaaaaagagaacagatg
gcaggaaatgaattaactgacacattcaagtctaatcagttcataattagaatgtcaagg
gatactctttcgattctaaaacgacatttacaagaaaagaagtatagcgttttattaaac
atcatacaggaacatctttactttgatatgtatgaaggtgttgctcgtaataaacaacag
atagatgccacatctggtgctatggtaggcgaagctaccagacaagataacaaagctaaa
gtctgttatggacttctaaaggaaccagatattcagtgtgtggcaccagccgaagaagaa
gaggatgatactggcggaggagacggagataaaccgaaaaagaaaaaagcaaaaaaagat
cctttgttttcaaaaaaaactaagactgatccaaacgcaccagctgtaggcaggatgcca
ttgcctaatcttaaggatgcagataagttggaaaaagttaaagcattgagggaagcatcc
aaaagagttattctagggcccgattcgctgccgtctatatgcttttatacattgttaaat
tcaattcatagtgtaacagcggcggaaatagcggaagactcgagtttgttggctatcgga
ttcagcgattctggtataaaagtatggagtttgattccacaaaagttgagattgatgaaa
acgggtgaacaattacaggatattgatagagaagcagacgacgtgttggtcagaatgatg
gatgatcgaacggcggaaactgcaagaaatctattcggtcatagtggacctatttatagt
ctttcgttcagtccagatagaaatctcttactttcgtcatcggaagatgctacaattagg
ttgtggtctctgcatacatggacatgcgtcgtctgctacaagggtcacttgtttcccgtg
tggtgcgtaagattctcgccgcatggttattacttcgcaactgcctcgaacgacaagaca
gccagattatgggcaactgattctcatcagccattgcgaatatttgctggccattattca
gatgttgatgtggtacaatttcatccaaattcaaattacgtcgcgaccggctcgagtgat
cagactgttagactgtgggactgcgtgtccggcagtcaggtccgtttaatgaccggacat
aagggatcaatttattctctagccttctcgacggaaggacgatttttagcttccgccggt
gccgatcatcgtgtcctcgtatgggatctggcgcacggtcatcttgtcgcggctttgtcg
gaccacaccggtaatattcattgtctgtcgttcagtcgagatggcaatattctagtttca
ggatctttagattgcacattaaaattgtgggattttacaaaactagcggaagagatgagt
ttggaggacgttaacgtctcgcataatcccgatgtgaaaactaatgcggaatcttattta
ctgcgtacctttgccacaaaaaattcacctgtaatagcgttacatttttcgcgtagaaat
ttactgttaggtatcggtatgttcgattcgacatga
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integrated database retrieval system
