Pseudomyrmex gracilis (graceful twig ant): 109857223
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Entry
109857223 CDS
T05003
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03440
Homologous recombination
pgc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109857223
03460 Fanconi anemia pathway
109857223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgc03032
]
109857223
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109857223
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
109857223
DNA replication proteins [BR:
pgc03032
]
Eukaryotic type
DNA Topoisomerases
109857223
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
109857223
FA (Fanconi anemia) pathway
109857223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
zf-CCHC_6
HVO_2753_ZBP
Hao_C
zf-CCHC
Toprim_4
Motif
Other DBs
NCBI-GeneID:
109857223
NCBI-ProteinID:
XP_020288945
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MAHFTFYNLLSRVSFCNVTLKQTVCNSPKFVNNLYLIRQYCSRETFGKRNMKVLNVAEKH
DAAKNIAYFLSRGNNRKREGLCKYNKIFDFNVQLWDQNCQMVMTSVSGHLLNYDFTGSYR
KWLGCNPLSLFEAPVVKQCSEDTYVQIKKTLEREVRSCNALIIWTDCDREGENIGFEIIE
VCKAVKPNIRVYRAKFSEITRQSVDRALQTLGEPDKAMSDAVDVRSELDLRIGAAFTRFQ
TLRLQKVFPENLKDMLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKLKVTDERNGIIVE
FRWARVRLFEKMPCQIFLDMCLEKPEAKVEKITCKPKSKWRPLPLDTIELEKQGSRKLRL
NAKETMRIAERLYTQGFISYPRTETNIFPKELNLAPLVEQQVNNRAWGNFAQNLLETGIT
PRQGKKSDQAHPPIHPTKYTDNLQGNDAKVYEFVVRHFLACLSKNAEGRETTVEINIAGE
KFTANGLEIIVKNYLDVYIYDKWSNKEIPSYVQGQIFRPASIDMVEEKTSPPSLLTEAEL
IALMDKHGIGTDATHADHIDTIKSRQYVGLTDTQHFMPGKLGIGLVMGYDDMGFQMSKPH
LRADLEKDLQLICQGQKDPKEVLQNQINKYREVFRVSMERANLIDNALAKYLDERPTQAE
QSQIMPVDEVAVFKCPKCNSNMILKNRRQGRGKYISCTGYPACTNTIWFPEAVEDVEILN
ETCNQCTTDMRKLKFKLVRNVIPLYGTSYTTCIGCDTVFKEMLNIKDDAISQTGRVNSVS
QNNTRNTSSFTSTSSTSQSQSTRRQVPTSVMRSSENDSDVELIETPNLSGRHAQNHSNTF
RSNNPSNNVNRSATTSDNRRSLDFWNNMVDFNNSENRSDRSRNAVNANDRTNAWGNIDSS
AEIMCKCHETAIQLTVRKEGPNKGRLFYKCAKPQGSGCDFFLWASDSETQNDTTNDRVNR
VDRSNNSAGHSSRIAAPNNDWQVASTNDVMCTCDQPARKLTVNKEGPNKGRQFYGCPNGM
NSTCNFFQWADENNAGNCENTNWNNNSNANRGSRARSNRGGSAPKRPKLTGTKRKCGNCG
VEGHTRTKCPHNAMD
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggctcattttacattttacaatttactaagtcgtgtatcattttgcaatgtaacgctc
aaacaaaccgtctgcaactcacccaagtttgtaaataatttatatctgataagacaatac
tgctcgcgagaaactttcggaaagcgcaacatgaaagtgttgaatgttgccgaaaaacac
gatgctgcaaaaaatattgcttattttttatcgagaggtaacaatagaaagagagaaggt
ttatgcaagtataacaaaatctttgacttcaatgtacaattgtgggatcaaaactgtcaa
atggtaatgacatcggtatcgggtcacttgttaaattatgacttcaccggatcttatcgc
aagtggctaggctgtaatccattgagcctgtttgaagctccagtagtcaaacagtgctcg
gaagacacttacgtacaaatcaaaaagactttggagcgagaagtgcgatcttgcaacgca
ttgatcatttggactgattgtgacagagaaggagaaaacattggttttgaaatcatagaa
gtttgcaaggcagttaaaccaaatattcgtgtgtatagagcaaagttctcagaaatcaca
agacagtctgttgatagagctttacaaacattgggagagccagataaggcaatgagcgat
gccgtagatgtgagaagcgaattagatttaagaattggcgctgcatttacaagattccaa
accttaagactgcagaaagtgtttcccgaaaatctcaaagatatgctcataagttacgga
agctgtcagtttccgacacttggattcgtggttgaaagatttttagccatcgatcgattc
aaatccgagccttattggaaattaaaagttactgacgaacgtaatggaataattgtggaa
ttcagatgggccagagtaaggctgttcgagaagatgccctgccagatcttcttggacatg
tgtttggaaaagcccgaagctaaggtggagaaaataacatgcaagccaaagagcaagtgg
agacctctacctttggacacaattgaattggagaaacaaggttctcgcaagttgcgtttg
aacgccaaggagacgatgagaatagcggagagattgtatacccaaggtttcatcagttat
ccgcgtaccgagaccaacatattcccaaaggagttgaatctagcacctctggtcgaacaa
caagtgaacaatcgggcgtggggaaatttcgcgcaaaatttattggaaaccggaataact
cccagacagggaaagaaaagcgatcaagcgcatcctccgatccatcctacgaagtacacc
gacaatttgcaaggaaacgatgctaaagtctacgaatttgtggtacggcatttcttggct
tgtctgtcgaagaatgcggagggtcgggaaacaacggtggagatcaacatagcgggtgaa
aaattcacggctaacggtctcgagattatagtcaagaattatctcgatgtgtacatttac
gacaagtggagcaacaaagagattccctcttacgtacagggacagatctttcgacccgcc
agcatagatatggtggaagagaaaacctcgccgccgagtttgttgaccgaagccgagttg
atcgcgttgatggacaaacacggcatcggcacggacgcgactcatgccgatcacatcgac
accatcaaatccagacaatacgtaggcttgaccgacactcaacacttcatgccgggcaaa
ttggggattggactggtcatgggttacgacgacatgggatttcaaatgtcgaaaccacat
ttgcgcgcggatctggaaaaggatttgcaactgatatgccagggtcaaaaagatccgaag
gaagtgttgcaaaaccaaattaacaaataccgcgaagtgttcagagtgtcgatggaacgc
gccaatttgatagacaacgctctggcaaaatatctcgacgaaagaccgactcaagccgaa
caatcgcaaatcatgccggtggacgaagtcgctgttttcaagtgtccgaaatgcaactcc
aacatgattctgaaaaacagaagacaaggcagaggaaagtacattagttgtacgggatat
ccagcgtgtaccaacacaatctggttcccggaagctgtggaggatgtagagattttgaac
gaaacatgcaatcagtgtacaacggacatgcgcaaattaaaattcaagctggttagaaat
gttataccgttgtacggcacctcttacaccacgtgtataggctgtgatactgtgttcaaa
gaaatgctgaatataaaagacgacgctataagccaaactggaagagttaattccgtcagt
caaaataatacgaggaacacgtcgagtttcacttctacctcaagtacatcccagtcgcag
agcactcgacgacaagttcctacaagtgtgatgagatctagtgaaaatgacagcgacgtt
gagttgattgaaactcccaacttgtccggaagacacgcacaaaatcattccaacactttt
cggtcgaacaatccgtcgaataacgtcaatagaagcgcgacaacatcggataatagacga
agtctcgatttctggaacaacatggttgactttaataattcggaaaacagatcggatcgg
tccagaaatgctgttaacgccaacgatagaaccaacgcgtggggtaatattgacagcagt
gccgaaattatgtgcaagtgccatgaaaccgcgattcaattaacggtgaggaaagaggga
ccgaacaaaggacgtctgttttacaaatgcgccaagccacaaggtagcggttgtgatttt
ttcttgtgggcatcggacagcgaaactcaaaacgatacaacaaacgatcgtgtaaatcga
gtggatagaagcaacaacagtgctggtcactcgtctcgtattgctgctcctaataatgac
tggcaagttgcgtcgacgaacgatgttatgtgtacctgtgatcaacccgcccgaaaactg
acagttaacaaagaagggccaaataagggacggcaattttacgggtgtccgaatggcatg
aactctacttgcaatttctttcagtgggcagatgagaacaatgctggtaattgtgaaaat
acaaactggaacaataattctaatgcaaatagagggagcagagcgcgtagcaatagaggt
ggcagtgctccgaaaaggcccaagctcactggcactaaaagaaagtgcggaaattgcggt
gttgaaggtcacacaagaactaaatgtccacacaacgcgatggattaa
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