Pseudomyrmex gracilis (graceful twig ant): 109857390
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Entry
109857390 CDS
T05003
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04137
Mitophagy - animal
pgc04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109857390
04137 Mitophagy - animal
109857390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109857390
Membrane trafficking [BR:
pgc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109857390
Protein recycling
Other Rab GTPase associated proteins
109857390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
PRANC
Hen1_N
Motif
Other DBs
NCBI-GeneID:
109857390
NCBI-ProteinID:
XP_020289222
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MYSTKTPTLRIDEADLKCKNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERVSHAQLPDT
DSTNRSTNASGHKYYEEKKVQQEKKYKLLNISFRKPVTKVQGYQELYHELLKDNPDLEKV
KSENRELLMYISKTLVEKDVRKCIHSFVLDILQNKDVKRIEELSEITQNFYLVFGKRLEN
STKYADIPVEIKEKLLDYVERYAMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKN
LECRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASA
DEFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAE
SLNIAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDDLQAKNMDIIKQAEEL
KNKMMNFKEKIKEDVSKVIERTPLLISHSQRVPTNLDSEDVESYQLPPQLFSRQIYPHST
NDTTDGAMTDLSSDLMRTSLVEDSVTPSPTFDFPSFIGDDSLEVSKGEDETSLISLDTQS
DLASGETQIFKRHMTDSLLDECPTPETNLPPALKPISVEDYHGFTIQGSNIPTIPCNTGD
SSIIPANLDSDNYSNYNYQNM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtattccacaaagactccgactcttcgaatcgacgaggcggatttaaaatgcaaaaac
ggatgcggattctacggtaacgcggaatgggaaggatattgcagcaaatgtcatcgcgaa
catttacaaaaacgtcgggcccaagctgagcgtgtgtctcacgcgcaattgccggacacg
gatagtactaatcgatcaacaaatgctagcggtcacaagtattacgaggagaagaaggtg
cagcaagagaaaaagtacaagttattaaatatctcatttagaaaaccggtcacaaaagtt
cagggttatcaggaattgtatcacgagttgttgaaggacaatccggatcttgaaaaagtt
aaatcagaaaatcgagagttgttaatgtacatatctaaaactctggtagagaaggatgtg
agaaagtgcatacattcgtttgtattggacattcttcagaataaagatgtgaaaaggata
gaggaactgtcggaaattacacagaatttttatctcgtgtttggaaaacgtctggagaac
agcaccaaatatgcagatatacccgtggaaattaaagaaaagttattggattacgtagaa
agatacgcaatgactttgttatatagaattctgttttgcccgccatttacaacagacgag
gagaaagacttagctatacaaaagaggatacgacagttaaattgggtgagtggcaagaat
ttggaatgtagaattcacgagacaagctcggaagttagagaacttgtttacacatccatt
acagatctcttaaatatggattctgctaaggcaccccaagaaaaattggcatgtgttatt
cattgctgcagaaatatatttttactgctgcaacagtcggttgacggtcccgcatctgcc
gacgaatttcttccggcgctcatatttatcgttttaaaagccaatcccgcgcgtctcaag
agcaatatcaattttattacaagattctgcaatgccagcagattgatgactggagaagga
ggatattacttcacaaatctgtgttgcgcggtgtcgttcatagaaaacttgactgcggaa
tctttaaatatagccgaaaaagatttcaatgcatacatgtcaggtgaatgtgtaccggct
aacacatgggagtcggctcttatgatatgcgaaagtttgcactttatgtgcgaggacata
actctactggacgatttacaagcaaaaaatatggacatcataaaacaagcggaagaactt
aagaacaagatgatgaattttaaagagaagatcaaagaagacgtgagcaaggtgatcgaa
agaacgccgttactgatatctcacagtcagagagtgcctactaatttggatagcgaggat
gtcgaaagttatcagttgccgcctcaattattttctcgacagatatatccgcattctacc
aacgatacaactgacggcgcaatgacggatttgtcaagcgatttaatgagaacatcgtta
gtggaggattccgtaacgccttcgccaactttcgacttcccatctttcataggcgacgat
agtctggaagttagcaaaggcgaggacgaaactagtctcattagtttggacactcagtcc
gatctcgcatctggagaaacgcagattttcaaaaggcatatgacagatagtttattagac
gagtgtccgacacccgaaacaaatctgccacccgctctgaaaccgatcagcgtcgaagat
tatcacggcttcacgattcaaggatcgaacataccgacaattccgtgcaacacaggcgac
tcatctattatcccagcaaacttggattcggacaactattccaattacaattatcaaaat
atgtag
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