Pseudomyrmex gracilis (graceful twig ant): 109857505
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Entry
109857505 CDS
T05003
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109857505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109857505
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109857505
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109857505
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109857505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCCH_12
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCCH_DUS3L
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
109857505
NCBI-ProteinID:
XP_020289440
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MECVVANVDNMQFDIEIALGEQFGALPLPFTGMDKSIAAVCQFYPKGSCNKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKIMITCHFCGEGGHKAIYCNKMPPDVREQAQVRQEIDGTAHTTHHNGPPQPRGPQKP
LEEVTCYKCGQKGHYANKCPKGHLAFLSHAHTSGSGGQNPNYRR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcgtggtggcaaatgtggacaatatgcaatttgacatcgagatcgctcttggt
gaacaatttggagctcttccgttaccatttaccggcatggacaaatcgatcgcagcagta
tgtcaattttatcccaaaggttcttgtaacaaaggagcgtcatgtccatttagacatgta
cggggtgatcgtacaatagtatgtaaacattggctgagaggtctttgtaaaaagggtgat
caatgtgaattcttacacgaatatgatatgacaaaaatgccagaatgttacttttattct
agatttaatgcatgccataacaaggagtgtccgttcttgcacatcgatccagagactaaa
gtcagagattgtccgtggtatgatcgtggattctgtaggcacgggccactgtgcaggcat
cggcatgtgagacgagttttgtgtatggcttatctagctggtttttgtccagaaggaccg
aattgcaaattcatgcatccgagatttgaattgccagcggtgcaagacatgcagccgaag
gaaggcaaaaagataatgataacttgtcacttctgcggagaaggtggtcacaaagcgatt
tattgtaacaagatgccacccgatgtacgagaacaagcacaagtcagacaagaaatagac
ggtaccgctcatacgacacatcacaacggtccgccgcaacctcgaggtccacaaaagccg
ctcgaggaagtgacttgctacaagtgcggacagaaaggacattatgccaataaatgtccg
aagggtcacttggcctttttaagtcacgcgcatactagtggcagtggtggacagaatccg
aattataggagataa
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