Pseudomyrmex gracilis (graceful twig ant): 109857652
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Entry
109857652 CDS
T05003
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109857652
04131 Membrane trafficking [BR:
pgc04131
]
109857652
03029 Mitochondrial biogenesis [BR:
pgc03029
]
109857652
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109857652
Membrane trafficking [BR:
pgc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109857652
Mitochondrial biogenesis [BR:
pgc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109857652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_Maestro
Asp_DH_C
Motif
Other DBs
NCBI-GeneID:
109857652
NCBI-ProteinID:
XP_020289763
LinkDB
All DBs
Position
Unknown
AA seq
2899 aa
AA seq
DB search
MAQLNNVLKAVETLNALRESDTLSDSGASNRKEKISCCTVIVEGICSPAVRQNAKFPQIL
TATIETLLALCNDEESDVRMVADESLNKIIRIMVDSNISKIQVELYNEIKRNGPARILRA
ALLRFGLLSHMIRPSRGKAYVSNLIPCIVIIAHRSEDIVIETLSHSLPLIFKVLGPFMTD
KDVKNLLRAFFENISSPQAAFRRAAANMILATCINCRKPQFFLNYVLNHLLDIIMPARNV
EDHSSVIIGVFGCLRVILPHICKPSEPEDVETQQTDSLLHIYELGLHYTKWHSDHNVINA
ALETLVQLLKMPPKSLVSVLLSSEGITQSKIITNQNAHAPSLGQMSISSASTACGGNSES
ILNLHEPDVPEITSNIDKWISDTKIITPPVACSVQTQEESHTTSDVIELKGKVLENLCGL
KIGVVDNEVVEEGSDVGSEIEKSERTTYPSLQSEQSKEEGSYSDEATLSFASPKKSSLDF
PLYEADVGSFTDSDMPVKFCCRYLVSSFLLAGKPGHLISDKLFRVSVKSLALTCVGYILK
LDPHLFTMTVAREPSCNETNQLIADILLFANHPDPQIRGNIAMVIGFFLKSVFVQYGGSF
RDFEARCSIENGHGNVSLDDMIKLLLNGLNDDSATTCRQTLDALNICLTELLESVDNEHG
LTILAALPKLMKNSYFLVKVKLVQLLSKLSYVTIEHIAGQTLFQEHFVDVIITLLGDQDQ
RVRHAASDAIVKSIPFLYFRHPQEDTVTRKATRYTQQFLSTVTTSISELSSCQIKHKPFV
NTSIKPFVFLNHYDGPSHDSGVEYSLSRVVNILTEIMTVHSSKYLIYGCCETLFCLSETY
PTTVYVRGWDYILPKTPLKKSKRSGDRSDASDINLMNEMIAPVGSGLLSLAMPLLTSSTI
SLDLSTHRHLILLAGNLASGLAVCNFKAGSDPIKLWSTCKDKHLEFLLTHIMRVLNIFVH
VIDEVQLTQSSSKPLLPSLSTAQTLSPKKKIVPEQSRSKEKGEKIGILRSGKELIGTFVG
IPHYMKIHDILKAAHSNYLVTLQHEASEMYVSLLNATLDVLSQILEIAFVNEAGRIAEEV
LYYLKTTVVLSPTATVRCVQQLLKCLFGTNVCAQWSELDTQKNLDRRDTLQDDIRGFYNQ
CFQHPARQMANTIKRIGNNCRGENEPDTGWIGLLRRKSDRKFSSVFKTLARSSDQKTSVA
SFIRLFEPMVIKSLKQYTVTSNIALQCQVLMLLSQLVQLKVNYCLLDSDKIFIGFVLKQF
EFIEEGHIQQTEELLPKVFNFLVHLSYEKNHSKTIIGVPKIIQLCDGLMASGQPAISHCI
PALAPVIEDIFLVRNGSSSVIEQRELETTKDVLIAMLLRLVEYHEVIELLALCLAESRFS
GDGNGEEKWRRWSRLTMDTVLPIMAAGKLKIESEKAHIALVKLFAAISPTVFRPVDPLLK
ILFTASISATASTLRLKRWLGMINVVLLSLISCAKEEAMLARLSDLSICVTDVSQLFSPS
EDPASKSECNTDPLNVMSTLSRQASPEQILARFIFKVINLISTKVFNLLGLINHKSADPF
VGFSDYTADDIYLVHQFAFFLQLCIHMFESGSHCKVANATMQMIQGRNVPDEEKLLIDDL
NYLMLNIGNTCPTVTCQWAYLMILLGYNEMSFWSKILGIGKPDYVAYVRPSDKKTHDHTT
SSINIQIIRRGGIILFCDYICENLNDVEPLTWLLVNHIEEAINIATESPVRDLLTTAIHR
NPAASGLLVQAIATKCTDLSRPSFIKRLLQCIEGAHHSQSGAVIMTLIPGLLSTKYLALS
RMAAKIASRKVEILLTTNAEDVINQLSKEEIVKIMDTLQITKLARKHGGLVSLLNKLAVQ
YYDLSPLELDQCRPFNPSTVKSVQLDRNWFLSQVKLRCCQPNVGNNPVELAQLLKNLDFD
DCMSILSCKEFNLKILKHCVILGARLSVEKCQQLEFGQAQSEKDFYFDANPLYVAAKQCL
LEHIHYICEVMPKPHQIYNPEADNSSGKELKYAARFSELLSDSLYWEMLFTVIPTVRVYM
KTLPKLAKYNVAKIDVKFEEDIARFSLLCLELAHWMIHSDKKNVRKSRPHDTYLALSCAA
EILRQAAPSKIFGDGARYTWVCSAAISLTKIVESILTTIEPLPLVDSHALEPALRDEDTR
DYARACIQMTSIVTWLEKCQVENSTRNIPPYLFNAIKSLVISVSRQPLVNSYILTPPLVW
RRGCHVVGSGPTKCYFPLLSSESNILLEVDILEQFIYRVNLLGWTSRSQFEEIWMAFLSV
LNFLQNENAPSEEMATLIQASSLAIQAITRLLLQTLLLPCPGNPDGSAYVHHPRDPQLSV
HKISSRKLYAIQELLIWKYEYMNDSENKTGLKLDHIFHRTNVERTSSSDKFMYSQLSVSY
LWSLCNLYEDKLNASVLDLKNRRNDALMSASLDLDSCLRFLIEHYTTWLLPQANTPVQLL
TEIVKSILAISELFLERSQYQWMLDVCLEVSRIHPSENAILHQYLAISVCKAAAVLTPLD
LETLDKVKRIVDVNLKSGFLASRVSALHGSLYLLQSAVLTKCEETMNIIHPLTIEYIQKH
IDSQDSNSVLDQSEEHQGVMWALVFFLLEHAEDTPPDTEAPAVLELVLSLVTSQNISYGL
HQTLLQGLERLVATRSVVGKVAEQIVKVAIDRLKQPSPLLALPALQLLLTCMYTEAADRL
NQPGAEEPLPDVEPEALVRSIERISAIFDKIRKGHPMEVEVLCTVLSHVLTDFFPPSEIL
TKVIGEFLSPQQPHPRLLSAVVFKVCEKACTSTEMELLQDWVVFSLPNFIQSLPIAMSTW
CLSCFFISASTNHWLRALFPYVQSRIGKYDYEDKKILCIAASDFYYKLPKESQKKAFVET
FETAAKEPGTPFTDILTSF
NT seq
8700 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactgaacaacgtgttgaaggctgtggaaacactgaacgcgctacgtgaatca
gacacactgtcggattctggagcaagcaacaggaaggaaaagatatcgtgctgcacggta
attgtcgagggtatatgttcaccagccgtcagacagaatgccaaatttccgcaaattctc
actgctactattgaaacactgctggcgttgtgtaacgacgaggaatcggatgtcaggatg
gtcgcggatgaatctcttaataaaattataaggataatggttgacagcaacatcagcaag
attcaggtagaactttacaatgaaataaagagaaatggtcccgcgcgtatactgagagct
gctctcctgagatttggtctgctgagtcacatgatacgtccctcgaggggtaaagcttac
gtgtcaaatctgataccttgtatagtcattattgctcatcgatccgaggacattgtcatc
gaaacgttgtcgcactcgttgccgttaattttcaaagtgttaggaccatttatgacagat
aaagatgtcaagaacttgctgagagcatttttcgagaacatttcttcccctcaagcagct
tttcgcagagcggcagctaatatgattctagcaacttgtataaactgcaggaaaccgcag
ttctttttaaattatgtgttgaatcatctgttagatataataatgccagcgagaaacgtc
gaggatcactcgtccgttatcataggcgtgtttggatgcttaagagtgattttgccccac
atatgcaaaccctctgaacccgaggacgttgagacgcaacagacggatagtctgttgcat
atttacgagttgggtttgcattacacgaagtggcattccgatcacaatgttataaatgca
gccttagagacgctggtgcaactcttgaaaatgcctcctaagtcactggtgtcggttttg
ttgtcgtcagagggcataactcaaagcaagataataacgaatcaaaacgcgcacgccccg
tcgctgggccagatgagtatttccagcgcgagtaccgcttgcggcggaaattcggaatca
attttgaatcttcacgaacccgacgtgccggaaattacgtctaacatagacaaatggata
tcggatacaaaaataataacaccgccggttgcgtgcagcgtgcagacgcaggaggaatcg
cacacgacgagcgacgtgattgagttgaagggaaaggttttggaaaatctttgcggtctg
aaaatcggagtcgtcgacaatgaagtcgtcgaggagggtagcgatgttggaagcgagatc
gaaaagtccgaaagaacgacgtatccgagtctacagagcgaacaatcgaaggaggaagga
agttactccgacgaggccaccctgtcgttcgcctcgcccaagaaatcttccttagatttc
ccgttgtacgaagcggatgtcggtagtttcacggactcggatatgcccgtcaagttctgc
tgtcgttacctagtatcctcattcctgctggcgggcaaacccggtcacttgatatcagac
aagctgtttcgtgttagtgtaaagtctctcgctctaacgtgcgtgggttacatcttgaaa
cttgatccccatttgtttacaatgaccgtggccagagagccgagctgcaatgagacgaac
caattgattgcagacatcttgctgtttgcaaatcatccagatccgcagatcagaggcaat
atagcaatggtgatcggattttttttgaagtccgtgtttgttcagtacggcggctcattt
cgagacttcgaggcgaggtgttcgatcgagaacggtcacggaaacgtgtcgttggacgac
atgataaagttgcttctaaacggcttgaacgacgattccgcgacaacgtgtcgtcaaaca
ctggacgcgttgaatatctgcttgacggaactgctcgaatctgtcgataacgaacacggt
ctcaccattttggccgctctgccgaaactcatgaagaattcgtattttctcgtgaaagtg
aaattggtccaattgctgagtaaattgtcgtatgtcacgatcgagcacattgcgggacaa
acgttatttcaagagcattttgtcgacgtgataataacgttattgggcgatcaagatcaa
agggtgagacacgctgcgtcagacgccattgttaaaagtattccgtttttatactttcga
catcctcaggaggatacggttacgagaaaggccacgcggtacactcagcaatttttaagc
accgtaacgacgagcatctcggaactgtcgtcgtgccaaattaaacataagcccttcgtg
aacacgtccatcaaacctttcgtgtttctgaatcattacgacggaccgagtcacgactcc
ggcgtggaatattccctgtcccgcgtagtcaatatccttacggagataatgacggttcac
tcttccaagtatttgatatacggatgctgcgagactctcttctgtctgagcgagacttac
cccaccacggtttacgtcagaggatgggattatattttgccgaaaaccccgctgaagaaa
tctaagagaagcggcgatcgatcggacgcgagcgacatcaatttgatgaacgaaatgatc
gccccggtgggcagcggtctcttgtcgctggcgatgccattgctcacgtcgtcgaccatc
agtctggatctgtccacgcaccggcatctgatacttctcgccggcaatctggcttccgga
ttggccgtgtgtaacttcaaagcggggagcgacccgataaaactgtggagcacgtgcaag
gacaaacatctggaattcttgttgacgcacatcatgagggttctcaatatcttcgttcac
gtcatcgacgaggtgcagctgacgcaaagcagctccaaacctctgttgccctccctgtcg
accgcgcaaacgttgtcgcccaagaagaagatcgtgccggagcaatcgaggtcgaaggag
aagggcgagaagatcggaatcctgaggagcggaaaggaactgattggaacgttcgtcggc
ataccgcattacatgaagatacacgacatcctgaaagcggcgcattccaattacttggtc
actctgcagcacgaggccagcgagatgtacgtctcgctgctgaacgcaacgctggacgtg
ctctcgcagattctcgagatcgcgtttgtcaacgaagccggccgaatagcggaggaggtt
ttgtattatctaaaaaccaccgttgttttatcacccacggcgacggtacggtgtgttcag
cagttgctcaagtgcttgttcggcacgaatgtgtgcgcgcagtggagcgagttggacacg
cagaagaatctggatcgacgcgacaccttgcaggatgacattcgcggtttctacaaccag
tgctttcaacatcccgcccgacaaatggcgaacacgatcaaacgaataggaaacaattgc
aggggcgaaaacgaaccggataccgggtggataggattgttgcgcagaaagagtgatcgc
aaattctcgtcggtgttcaagaccctggcgcgatcgtcggaccagaagacatccgtcgca
tctttcattcggctcttcgagccgatggttatcaagtctttgaagcagtacaccgttacg
agcaacatcgcgttgcagtgccaagttctgatgttgctgagtcagctggtccagttgaag
gtcaattactgtttactggattccgacaagatattcatcggatttgtgttgaagcaattc
gaatttatcgaagagggtcacatacaacagaccgaagaattgttgccgaaggtgttcaat
ttcttggtgcacttgtcttacgagaagaatcactcgaaaacaataatcggcgtgccgaag
ataattcaattgtgcgacggtctgatggcgagcggacagcccgcgatttcgcactgtata
cccgctctcgctcccgtaatcgaggatatatttctcgttcgtaatggcagttcgagcgtg
atcgagcaacgcgaattggaaacgacgaaagacgtgctgatagccatgctgctgcgtctg
gtggagtatcacgaggtgatagagctcttggcattgtgtctggctgaatccagattcagc
ggggacggtaatggggaagaaaaatggcgacggtggtcgagactgaccatggacaccgtg
ctgccgataatggcggctggaaaactcaagatagaatccgagaaagctcacatcgcgctc
gtgaaattgttcgccgccatctcgcccacggttttccgaccggtcgatccacttctgaag
atactcttcaccgcgtcaatatccgcgacggcttccacactgagactcaagcggtggttg
ggtatgattaacgttgtgctgctctcgttgatttcctgcgcaaaagaggaggcgatgctg
gcacgtctctcggatctcagcatatgtgtgacggacgtatctcagctgttctcaccgtcc
gaggatccggcctcgaagtccgaatgcaatacggatcctttgaacgttatgagcactctg
tcgcgtcaagcctcgcccgaacaaatattggccagatttatattcaaagtgatcaatctg
ataagcacgaaggtgttcaatctgctcggtctgataaatcacaaatccgcggatcctttc
gtcggtttctccgattacacggcggacgacatttatctggtgcaccagttcgcgtttttc
ctgcaattgtgcattcacatgttcgaatccggcagtcactgcaaggtggcgaacgcgacg
atgcagatgattcagggtcgcaacgtgcccgatgaggaaaaattgctgatcgacgatctg
aactatctgatgctcaacatcgggaatacgtgcccgacggttacgtgccagtgggcgtat
ttgatgatcttgctcggttacaacgagatgtccttctggtcgaaaattctgggcattggc
aaacccgattacgtcgcttacgttcggccgagcgacaagaaaacgcacgatcacaccaca
agcagcataaacatacagattattcgacgaggtggaatcatattgttctgcgattacata
tgcgagaatctcaacgatgtggagccgcttacgtggttgctggtaaatcacatcgaagaa
gcgataaacatcgcaaccgaatctccggtgagagatctgcttaccacggctattcacaga
aatccggccgcaagcggattgcttgtccaagccatagcgacgaagtgcacggatttgtcg
cggcccagtttcataaagcgtctgctgcagtgcatcgagggcgctcatcactcgcagagc
ggcgcggtcataatgaccctgataccgggattgctgtcaaccaagtatctcgcactgtcg
agaatggcggcgaagatcgccagccgcaaggtggagatactgttaaccaccaacgcagaa
gatgtgatcaatcagttgtcgaaggaggagatcgtgaagatcatggacaccctgcaaatc
accaaattggctcggaagcacggcggcttggtcagtttgctgaacaaactcgctgttcag
tactacgatctgtcgccgctcgaactcgatcagtgcagaccgttcaatccgtctacggtg
aagagcgttcagttggacagaaattggttcctgtcgcaagtgaaactgcgatgctgccag
ccgaacgtcggcaacaatcccgtggaactggcgcaattactgaagaacttggacttcgac
gattgcatgagcattctctcatgcaaagaattcaatttgaagattctgaagcactgtgtg
atattgggagcgaggctcagcgtcgagaagtgtcagcagttggagttcggacaggcgcaa
agcgagaaggatttctatttcgacgcgaatcccctgtacgtcgccgccaagcaatgtttg
ttagagcacattcactatatctgcgaggtcatgccaaagccacaccagatctacaatccg
gaagcggataacagcagcggaaaggagttgaaatacgccgctagattctccgagttgctg
agcgattctctctactgggagatgctcttcaccgtaattccgaccgtcagagtgtacatg
aagacactgcccaagttggcgaagtacaacgtggcgaagatcgacgtgaaattcgaggag
gatatcgccagattttccttgctgtgccttgagcttgcgcactggatgattcattcggac
aaaaagaacgttcgcaaatcgagaccgcacgacacgtatctcgcgttgagttgcgcggct
gaaattttgcgacaggctgccccgagcaagatcttcggagacggcgcgcgttacacttgg
gtctgttccgcggcgatctcgctgacgaagatcgtggagagtatattaacgacaatagaa
cctttaccgctggtggattctcatgcgctggagccggctctgcgcgacgaggacaccagg
gattacgcccgggcctgcatccaaatgacgtcgatagtaacctggcttgagaagtgtcag
gtcgagaattccacgagaaatattccgccgtatttgttcaacgcgataaaatcgctggta
atcagcgtgagccggcagccgctggtgaactcctacatcctgacgccaccgttggtgtgg
agacgcggctgtcacgtcgtcggatcgggtcccaccaagtgctactttcccctgctgtcg
tccgagtccaatatcctgttggaagtggacattctggaacagtttatctatcgagttaat
ttgctgggttggacgtccaggtcgcagttcgaggagatctggatggcgtttctgagcgtt
ctcaatttcctgcaaaacgagaacgcaccctcggaagagatggcgacgttgattcaagcg
agcagcctggcgattcaggcgataactcgattgctcttgcagactctgcttctgccgtgt
cccggcaatcccgacgggagcgcttacgttcatcatcccagagatccgcagctatccgtt
cacaagatcagttcgcgaaaactctacgcgatacaggagttgctcatctggaagtacgag
tacatgaacgactccgagaacaaaaccggattgaagttggatcacatatttcatcgaacg
aacgtggagagaacctcgtcttccgacaaattcatgtacagtcagctatcggtctcttac
ttgtggtcgttgtgcaatttgtacgaggacaaattaaacgcttccgttctggatttgaag
aacagacggaacgacgcgcttatgtccgcctcgctcgatctcgactcgtgtttgcgtttt
ctgatcgaacattacaccacttggttgttgccgcaggctaacacgcccgtgcaactgtta
acggaaatcgtcaagtcgattctcgcgatctcggaactctttctcgagagatcgcagtat
caatggatgttggacgtgtgtctggaggtctcgaggattcatccgtcggagaacgcgatc
ttgcatcaatacctggccatttccgtgtgcaaagccgccgccgtgttaacgccgttggat
ttggagactttggacaaggtaaagcgaatagttgatgttaatttaaaatcgggattctta
gcttccagagtttccgcgcttcacggctctctgtatttgctgcaaagcgctgtactgacc
aagtgcgaggaaaccatgaatattatacaccccttaaccatcgaatatatacaaaagcac
atcgattcgcaagattcgaatagtgtattagaccaaagcgaagagcatcagggagtaatg
tgggctctggtgttttttctgctggaacacgcagaagacacgccgcctgatacggaagcg
cctgccgtactagaattagtcctttctctagtcacgtcccaaaatatctcgtacggtttg
catcagactttgctgcagggtctggagagactcgtggcaacgagaagcgtggtgggaaag
gtcgccgagcaaatcgtcaaagttgcgatcgatcggctgaagcaaccgagtccgttgctg
gcactgccggctctgcagcttttgctgacgtgcatgtacaccgaggcggccgatcgtttg
aatcagcccggtgccgaagaaccgctgcccgacgtcgagcccgaggctttggtacgatcg
atagaacgtatctccgcgatattcgacaaaattcgtaagggccatccgatggaagttgag
gtgctgtgcacggttctgtcgcacgttctcacggatttcttcccgccgtcggagattctg
accaaggtcatcggtgaatttctgtctccgcaacaaccgcatccgagattactttccgct
gtggtcttcaaagtttgcgagaaagcttgcaccagcacggaaatggagcttcttcaggac
tgggtggtcttcagtttgccaaatttcattcagagtttgccgatagcgatgtcgacctgg
tgcttgtcctgtttcttcataagcgcgtcgacgaatcactggctaagagctttatttccg
tacgttcagtcgagaataggaaagtacgattacgaggacaagaagatcttgtgtatagcc
gcttcggatttttattacaaactaccgaaggagtctcaaaagaaagcgttcgtcgaaacc
ttcgagactgcggcgaaggaacccgggactccgttcactgacattctaacgtcgttttaa
DBGET
integrated database retrieval system
