Pseudomyrmex gracilis (graceful twig ant): 109857683
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Entry
109857683 CDS
T05003
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109857683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109857683
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109857683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109857683
NCBI-ProteinID:
XP_020289840
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVAHNRSKTHTRTKPSHNSAWDRTLSLLQLIHASTNRCCYYLEKMADENEDQWLYGESTD
GKEYVPLDTHSETHQNDSSLANIQKISESQEDQETEKAGEVLSETQEDTGSPDGENEVSS
SMNNGQEEIMDSTKNGMKEVSSQEDGEAASDSDSDDDVHVVIGDIKSTPAYGSLNIKRGG
LLTNASGLPDKLTKQPGKFSIDEFETIGVINGIPAHEFNLDQLEDKPWRQPGADITDYFN
YGFNEETWRAYCERQKRMRSESGVGLILNTGSGGGNPNSIRVPQVAITNDNSKYSGISGP
KRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRREYSRKPGFPDMSV
PPPGPGLPPFDIPPPGYAGDPNSFYMPETDPYYQSYEPTQDNQWGNDPTWQPTNLAIPMT
EGDDDKDMAPKTIPTMVPPTSIPPLMQPRDQRDSRDRERDRDRDRELESVNRDKDRDKDR
DRDREKDSMIRDRDRDSMTRDDDRDRDRSRIQYRHKDRHRHRSRSRSRRHKSRSRSPSRR
KKKSRRSDRERSKEESE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtagctcataaccggtccaagacccatacacgcaccaaaccaagccataacagtgcg
tgggatcgtacccttagcttgttgcaattaatacatgcttcaactaatagatgctgttat
tatctcgaaaaaatggcggatgagaacgaagatcagtggttgtacggtgaatcaaccgac
ggaaaagaatatgtgccattagacactcactcagaaactcaccagaatgactcttcactc
gccaatattcagaaaatatctgaatctcaggaagatcaggagacagagaaagctggtgaa
gtattgtctgagacccaagaagatactggctcacctgatggtgaaaatgaagtgtcgtcc
tcaatgaataatggacaggaagagataatggactcgactaaaaatggaatgaaagaagtt
tccagtcaagaggatggtgaagcagcaagcgattccgattctgatgatgacgtccatgtt
gttattggtgatatcaaatcaacaccagcgtatggtagtttaaatatcaagcgaggtgga
ttgttgactaatgcatctgggttaccagataaactcaccaaacaaccaggaaagttcagt
atagatgaatttgaaactattggagttattaatggaataccagctcatgaatttaatctt
gatcagttggaagataaaccgtggagacaaccaggtgcagatattacagactattttaat
tatggttttaatgaagaaacttggagagcatattgtgaacgtcaaaagcgaatgcgaagt
gaatccggagtcggattaatcttaaacactggaagtggtggcggcaatccaaatagcata
agagtacctcaagtagcaattacgaatgataatagcaaatactctggtatttcaggccct
aaaagggcaggtccaccaccaggaaggaaaatggcaggcactattgatgttattggaagc
tctggtttagcttccagaagaaatttagataaatctccaccaaaaggaaatgttatacag
gttatgactgctgacagacgagaatattcgaggaagccaggttttcccgatatgagtgtg
ccgcctccaggaccgggattgccgccatttgatatacctcctccgggatacgccggagat
ccgaattcgttttacatgccggaaactgatccatattatcagagttatgagcctactcaa
gataaccaatggggcaatgacccaacatggcagccaacaaatttagcaatcccgatgacg
gaaggtgatgatgataaagacatggcgcctaaaacgatacctacgatggttccaccgaca
tccattcctcctctgatgcaaccacgtgatcaaagggacagccgagatcgcgagcgagat
agagatagagatcgggaattggaatctgtgaatagagataaagatagagataaagatcgg
gatcgtgacagagagaaagattctatgataagagaccgcgatagagattctatgacacgg
gacgacgatcgagatcgcgatagatccaggattcaatatcgacataaagaccgacataga
catcgatcaagatcccgatctcgtagacataaatcaagatcacgaagtccgagccgacga
aagaagaaatccaggcgctcagatagagaacgttctaaggaggagagcgaataa
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