Pseudomyrmex gracilis (graceful twig ant): 109857834
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Entry
109857834 CDS
T05003
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109857834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109857834
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109857834
mRNA degradation factors
5'-3' decay
Decapping complex
109857834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
SspP
Motif
Other DBs
NCBI-GeneID:
109857834
NCBI-ProteinID:
XP_020290149
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MTDRTELRMNVAALKRVDPYVKNILETATHVALYTFNADENEWEKTDIEGALFLYSRNGE
PYNSILIMNRLNTNNLVEPVSPGLDLQLQEPFLLYRNSRGNIYGIWFYEKEECVRIANML
NELLKECEESLKINNKPVVKAKKTSGSNVNNVDIFSMLSKAQEDFNTSRSSGGGKGSGDS
GNKVRSKSPLSSTTDNVSGPLAAPLGPDVTSQSVMDFFAKAKVNPVHFKPSDQPAPGNAV
AIETKPFFGRFPSYPAAHTLEHIEKQQRSITPQPSTQSQSTPISSTNKSKKRNKTTQQES
LVSTTAPTAPVTQDLPLPVTRTNNDSNGSTGFLRIQSPTNTSTSKTSKASDITNANNANP
LASLFAHASGSTSSDDIMPAAAPTLSGRGSAPALIPPVMFAASSPSSEPLNRPLEPLTRN
QLLQAFNYLLKSDPDFINKLHEAYVKSFGEILS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcggacggaactgaggatgaacgtggccgcgttaaaacgagtcgatccctac
gttaagaacatcctcgagaccgcgactcacgtcgctctgtacacattcaacgcggatgag
aacgaatgggagaaaaccgacattgaaggcgctttgtttctctactcgagaaacggcgag
ccttacaacagcatcctcataatgaacagattgaatacaaataatttagtagaaccagtt
tcgccgggtttagacttgcaactgcaggaaccatttttgctatacagaaattctagaggt
aatatttatggtatctggttttatgagaaagaagaatgtgtgcgtattgcaaatatgcta
aatgaacttctgaaggaatgcgaagaaagcctcaagatcaataacaagcctgtagttaag
gctaagaaaacatcgggatctaatgtaaacaatgtagatatattcagtatgctcagcaag
gcgcaagaagattttaatacaagtagaagcagcggaggaggtaaaggcagcggtgatagc
ggcaacaaagtgagatcaaaatctccattgtcatctacaactgacaatgttagcggacct
ctggcagctcccttaggacctgacgttacttcgcaaagtgtaatggacttttttgcaaaa
gcaaaagtaaatccagtacattttaaaccaagtgatcaacccgctcctggtaacgccgtt
gcaatcgagaccaaaccgtttttcggacgttttccgtcttatccggcggcgcacactcta
gaacatattgaaaaacaacaaagatccataacgccgcaaccttcgacccaatcgcaatcg
acgccaatttcttctacgaataaatctaaaaaacgaaacaaaacgactcaacaagaatcg
ttagtgtccacaacggcaccgacggcgccggtcacgcaagatcttccactacctgtcaca
cggactaataatgattcgaacgggtcgactggatttctcaggatacagtcgccaaccaat
acgtccacttcgaaaacttctaaagcttcagacattactaatgccaacaacgctaatcct
ctcgcatcattatttgctcacgcttctggaagcacatcatcagacgatattatgcctgcg
gcagcacccacgttgtcaggaagaggatcagcgccagctttaatacctcctgttatgttc
gctgcgtctagtccctcatcagaacctttgaacagacctctggaaccattgacgaggaat
cagcttttacaagcgttcaattacttgttaaaaagtgatccggacttcatcaataagctt
cacgaggcctatgttaaatcattcggagaaatactctcttaa
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