Pseudomyrmex gracilis (graceful twig ant): 109858011
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Entry
109858011 CDS
T05003
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109858011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
Yop-YscD_cpl
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
109858011
NCBI-ProteinID:
XP_020290459
LinkDB
All DBs
Position
Unknown
AA seq
2222 aa
AA seq
DB search
MRCIRPVDIARLIAYLHRCLKFHNYEIRSCRLSLFNSFEFRFLPPRALAVLEFIYSEFNS
ESLYVHFFALNSIRKIACAQTPEISRRARMATEVANKKAEREALRGVIQQWNANRLDLFE
LSEPNEDLEFHGVMRFYFQDSGQKVATKCIRVASDATSQAVIETLIEKFRPDMRMLSVPE
YALYEIHENGEERKLRLDEKPLMVQLNWHIDDREGRFLLKRIDDKTNAQGVGFTGSADGS
SFRRKLSKREKKQIKKQEKLSRLKSLEQDENTAPGDQNGVAEKLYTELPETSFTRSISNP
EAVMRRRRQQKLEKKLQQFRSKDGGPDTGGTLKIYGEALCKDVPYKTLLLSVRDSAAQVV
REMLSKYGLEKVDPQLYCLVQVNGENVGGTAHQEYILDDDECPLAILMNHPSTRGSIMFH
VRRRPADYMPRKRKKKPAGKWNELDHRYEDERLPFLLELNPDGSDIPNGAGVRHRLQPNV
TEVGSERPIGPQAVQAQTLTLPGPTVMPRHCVIAFTENIVTLTPCSRDAHTYVNNQRIHQ
TTILQNGAIIKFGRMHTFRFIDPAPEDRIRQRHDSAKQIDYAYDRRSPDANSQDVGSEKF
LSGSGTPNGGNQTPGQTQERTTPSSPSKSATAARSPRSPTHPPEPTHNYETTFDLDGNVE
TASLSSSRDGNRLSQYDRQPRGTDPILPAVLEFLEETEETFLHAVITDVEPSAPQFKLAP
TYTLYLSARYRASTHYRPELQPTERAHRLTIMLANVATMIQRVIQERYMDTSSLAFWLAN
GSELLHMLKSDRHVGAFSTRAQDILTDAVHTAFGSLVRCVTLELTPAMTQFMADADEPAK
EAGVLQIFSNTMALLRRCRVNAALTIQLFSHLFHAINATAFNTLVSNGNLCVRWFGRRLK
TRLNALETWAERQGLELASQCHLATIMQATHLLQAPKYNAEELATLSSTCFKLNSLQVRA
LLQKYQPAADEPRLPAELIENVVRVAESVADTLARADGREIRLEEEPILGLALLLPEDGY
SCEVIRGVPPGLAEFLAPLQRDGLCRMAAQPTSSGYWTIYMIDHNNMRSPSAMSNRSGGY
TSHANQNQAQPEIHVIKLHKSTNGMGLSIVAAKGAGQDRLGIYIKSVVAGGAADVDGRLT
AGDQLLKVDGQSLVGITQEKAAEYLVRTGPIVTLEVAKQGAIYHGLATLLSQPSPVMTRA
YNSRPRYDHSEPTLGAAEMVGNHRATSHSLGDLLSLPKQAAYQDLPQPGPRRMSERDLPS
RLGHDATPQQIHSSKSVPALHNMGTEAKQQHEVFNPGYSRASSSNSVTPPVQPPPMATIN
SATSLRSRSSHNLHDPMRVGTLPPTGMVSRQQSSPNLNPNTSHMNIPSNVQNTEVERFYQ
NLSIYRSQDSTGKQISPQQMDDRNPQHVQKSSLRGSQNSLNRPSALEVSHIRDRPTSAYV
TQAQQQSYSTISNQMQQQGGPPPRSQSSRDIIRQEAKMQEMQEEVRRRELRGGAPIHQHR
PPMAYNINARGEAPPGQQMANVRPPRPLGSTSNLGTTAGYATTARQTTSGYNYPEAQHAS
YNNTQHNQYGQYGQYPNRYPMTGSQYGPMMTKSKSETIARGHQPMPNENLLGRVDTNNQE
AKSYGDQNRHFAQNSPHYPNGNLEQHVDQYTNDNVVGRTQNEENHPITTSESLPSRPTLP
SEDTFSESPPPPPPNTSTHPLYNKQADTRYTASMQDLPRGSYYPAGGINVMQQPRQYQYS
ATNPWQREEREKEQARRREAARQWRDQQIAELSALAHRTQQQEEQLRALQLERDFQKRAE
EAANQDDDEESNDLDNESTQRVQGLLRMAANQERAAQQQFSILSRTNAGNQSLRSNLQSV
GGQSTTTGHAHNPPNQAVPQTAGMSGQENSGLHMQPNQQQQSASQSEEQMHVSSNYGTPL
THFGSGQKSYSAGISHSAEDRELQRRIDEVKRKQAELEESQKKQEEHQLHSQQQTYQQSQ
QLRTQQPLHPGMLRLDNLIINGPMSSQNNVNDAPPPPERGSSYAVMSQQSALRSNGSTAS
NLPLVSQPASMKRVSFHDSNANSESMLRNIPTGTSNSLSMSMDTIREDPNNFITDAENLL
ASPKTPEGSSTSFTGTTPGVIGAQEVYKDPRQKRLAEKQKQQQNSQIGAVPEKLSFKEKM
KMFAMETGEDGTPRDKVKISRAQREIDNIGSPLNSNNNNNNNNNNNNNNNTTSGNNTNNN
RT
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgcatcagacctgttgatatcgcgcgccttatcgcctacctacaccgatgtctc
aaattccacaattacgagatacggtcgtgtcgtctcagtctgtttaactcgttcgaattc
aggtttcttcctccccgtgctctggctgttctcgaatttatatatagcgaatttaattca
gaaagtctgtacgtacatttctttgctttaaattcaattcggaagatcgcgtgtgcacag
actcccgaaatctctcgaagagcacgaatggcaacggaagtagcgaacaagaaggcagag
cgggaggctctcagaggagtcatacagcagtggaatgccaatcgtttagacctgttcgaa
ctgtcggaaccgaacgaagacttggagtttcatggcgtcatgagattctacttccaagac
agtggtcagaaggttgccacaaaatgtatcagggtcgcttcggatgcaaccagccaggca
gtgatagaaacgcttatagagaaatttcgtcccgacatgagaatgttatccgtcccggaa
tatgctctttacgagatccatgaaaatggagaagagcgcaagcttcgcttggacgaaaaa
ccgctgatggttcaattaaattggcacatagacgatcgcgagggacgcttcctgctgaag
agaatcgatgacaagaccaatgcacagggcgtcggttttactggatcagccgacggatct
agttttcgaagaaagctgagcaagcgagaaaaaaaacagattaagaagcaggagaagctc
agtcgactgaagagcttggaacaagacgagaacaccgcgcctggcgatcaaaatggcgtt
gccgaaaagctttacaccgaactaccggagaccagtttcacgaggagtatttcaaatcca
gaagcggtgatgaggcgccgtcgtcaacaaaagcttgagaagaagcttcagcagtttcgc
agcaaagacggcggccccgacacgggcggtacattgaaaatttatggcgaggcgttgtgc
aaagacgtgccatacaagacactgttgctgagcgtgcgtgattctgccgcacaagtcgtg
cgggagatgctctccaaatatggtctagaaaaagtggatccgcagctatattgcctcgtg
caggtcaatggtgaaaacgtgggcggaactgcacatcaggagtatatattggacgacgac
gagtgtcctttagcgatattaatgaatcatccttctacgcgaggttccattatgtttcac
gtgagacggaggcccgcggattacatgcctcgaaaacgcaaaaagaaacccgctggaaaa
tggaatgaactggatcacaggtacgaggacgagaggctaccgttcctgttggagcttaat
cctgacggcagcgatattcctaacggcgcgggagtgcgacatcgattacagccgaatgtc
acggaagtgggatcggaaagaccgataggaccgcaagcggtacaagcgcagacacttacg
ttaccgggaccgacggtgatgccgaggcattgcgtaatagccttcaccgagaatatcgtt
accctcacaccgtgttctcgagatgcgcacacctacgtcaataaccagaggatacaccag
actaccatacttcagaatggggctattatcaaattcggcaggatgcacacttttcgattt
attgaccccgcaccggaggatcgcatcagacaaagacacgattccgccaagcagatcgac
tatgcttacgatcgacgctcaccagacgctaacagccaggacgtcggctcagaaaagttt
ctctcgggttccgggactccgaacggcggcaatcagactccgggtcaaacccaagaacga
acaaccccgtcgagtccctcaaaatccgccaccgcggctcgtagtcctcgtagtcccacg
cacccgccagagcccacgcacaattacgagaccacattcgacctggatggcaatgtagag
actgccagtttgagcagtagcagagacggcaacaggctttcacagtacgatcggcaaccg
agaggcacagacccgattctgccggctgtcttggagtttctcgaagaaacggaggagacg
ttccttcacgctgtcatcactgacgtggagccctcggcgccacagttcaaacttgcacca
acttacactctttacttgagtgcgagatatcgcgctagcactcactacagaccggaatta
caacctacggagagagcacatcgactcacaatcatgctggcgaatgtcgccaccatgatc
caacgcgttatccaggaacgttacatggacacttcctcgttagccttttggttagcgaac
ggttcggaactgctgcacatgttgaagagtgacaggcacgtgggtgcattttccacacga
gcacaggacattttgacggatgcggtgcacacggccttcggctcactggtgcgctgtgtt
acgctggagctcacgcctgcaatgacgcagtttatggcggatgcggacgagccagcgaaa
gaggctggagtgttgcagatcttctcgaacaccatggcgctgctgcgaaggtgtcgggtg
aacgcagcgttgaccatacaactgttcagtcatctgtttcacgcgattaacgccacagct
ttcaatacgctcgtttccaacggaaatctctgcgtcagatggttcggacgcagactaaaa
acgagattgaacgccctggagacgtgggccgaacgacaaggcctggaactagccagtcaa
tgtcatttggccacgattatgcaggcgactcatttgctgcaggctcccaagtataatgcc
gaggaactggccacgctcagttcaacctgctttaaattaaattctctgcaagtgagggcg
ttgttacaaaaatatcaaccggccgcggatgagcccaggctacccgccgagttgatcgag
aacgttgtgagagtggcggaaagtgtcgcggatacacttgcacgcgcagacgggcgcgaa
ataaggctggaagaagaacccatcttgggactagcgttgctacttccagaggacggctac
agttgtgaggtaattagaggcgttccaccgggactagcggagtttctggcacctctgcag
cgagacggattgtgtcgaatggcggcgcaaccaaccagcagtggttattggactatttac
atgatagatcataataacatgcgtagtcccagcgcgatgagcaacaggtcaggtggttac
actagccacgctaatcaaaatcaagctcaaccagagatacatgtcatcaaattgcacaag
agcacgaatggcatgggtttgagcattgttgcggcaaagggtgcaggacaagatcgatta
ggtatctacattaaaagtgttgtcgctggtggtgccgctgatgttgatggtagattgaca
gcaggcgatcaactgctcaaggtggacggtcaaagtcttgttggaatcacacaagagaag
gctgctgagtatctcgtgcgtaccggtccgattgtaacattggaagtcgcgaaacaaggt
gctatatatcacggcctcgcaacgttattatcacaaccttctcctgtgatgactagagca
tataattctcgaccgaggtatgatcactcagagccaacgttaggagcagcggagatggtc
ggtaatcatcgagccacgtcccactcgctaggcgacttattatctctcccgaagcaggcg
gcatatcaggatttacctcagccaggtcctcgtcgcatgagtgagcgggatctaccgtcg
cggcttggacatgacgccactcctcaacaaatccacagcagcaaatctgtaccggcattg
cataatatgggcaccgaggccaagcaacagcatgaagtgttcaatcctggatacagcaga
gcttcttccagtaatagcgtcacgcctcctgttcaaccacctcccatggcgacgatcaac
agtgcaacttctttgcgttcaaggtcgagtcacaacttacatgatcccatgagagttgga
actttaccacccactggcatggtcagcaggcagcaatcatcacctaacttaaaccccaat
acatcgcatatgaatataccgtccaacgtgcaaaatacggaagtagagaggttttaccag
aatttgagtatttatcgcagtcaagattcaacggggaagcaaataagtccgcaacaaatg
gatgacagaaacccacagcacgttcaaaagagttctctgagaggatcacagaactcgctg
aaccggccgtctgctctggaagttagtcacatccgagaccgtccgacgtccgcgtacgtc
actcaagctcagcaacagagctactcgacgatcagcaatcagatgcagcaacaaggtggg
ccaccgccacgttctcaatcttcgcgcgacataattcgccaagaggcgaagatgcaagag
atgcaggaggaagttcgaagacgagaattgcgcgggggagcgccgattcatcaacataga
ccgccgatggcgtacaatattaatgctcgaggagaggcacctcctggtcaacaaatggca
aatgttcgtcctccaagaccactcggttccacgtcgaatttgggtacaaccgccggttac
gcaaccaccgcgagacaaactacatctggctacaattatccggaagcacagcacgcatcg
tacaacaacacccaacacaatcagtacggtcaatacggtcagtatcccaatcggtacccg
atgaccggaagtcaatatggcccgatgatgactaagtcgaaaagcgaaactatcgctcgc
ggtcatcagccgatgccaaatgaaaatctactcggcagagtagatacgaacaaccaggaa
gcgaaatcgtacggtgaccagaaccgacactttgcccaaaacagtccgcattaccccaac
ggtaacttggaacagcatgtcgatcagtacacgaacgacaatgttgtcggtcgtacgcaa
aacgaagagaatcatcctataacgacatcagaatcgctaccatcgagaccgactctaccc
tctgaagacacgtttagcgagagtcctccgccaccgccaccaaacacttcgacacatcct
ctgtataacaagcaagctgacacaaggtacaccgcaagcatgcaagatctaccacgcggt
agttattaccctgcgggaggaatcaatgtcatgcaacaaccacgtcagtatcagtatagc
gcgactaatccttggcaacgagaagaaagggaaaaggaacaagctcgtagaagagaagcc
gctcgacaatggcgagatcaacagattgccgagctaagtgcgttggcgcatcgaacgcag
caacaggaagaacagttgcgggcacttcaattggaaagagattttcaaaagcgagctgaa
gaagctgccaatcaagatgatgatgaggagagcaatgacttggacaatgagagtacgcag
cgtgttcagggattactgagaatggcagccaatcaagagagagccgctcaacagcagttc
tcgattttgtcgagaacaaacgcaggcaatcagtctctgagaagtaacctgcagtctgtt
ggcggccaatctacgacaactggccacgctcacaatccgcctaatcaagcggtacctcaa
accgcagggatgagcggacaggagaatagcggcttgcacatgcaaccaaatcaacagcag
caatcagcgagccaaagcgaagagcagatgcatgtttcgtccaattacggaacgcctctc
actcatttcggttccggtcaaaagtcttattcggcaggtatatcacactccgcagaggac
agggaattgcagcggagaatagacgaggtgaaacgaaaacaagccgaactcgaggagagc
cagaagaagcaggaggagcatcagctccactcgcagcagcaaacgtatcagcagagccag
cagttgcgaactcagcaaccactgcatcctggcatgctgcgcttggacaatttaatcatt
aatggacctatgtcttcgcaaaataatgtgaacgacgcacctccaccaccagagcgaggt
tcgagttatgccgtaatgtctcagcaaagcgctctcagatcgaacggctccactgcatca
aacctacctcttgtgtctcagccagcatcaatgaaaagagtttcttttcatgattcgaat
gcaaatagcgagtctatgctgcgcaatataccaaccggaacatcaaactcactgtcaatg
tcaatggacactatcagggaggatccaaataattttatcaccgacgcggagaatctgtta
gcgtctcccaagacgccggaaggatccagcacttcgtttactggcactactcctggagtg
atcggagctcaagaagtgtacaaggacccgagacaaaaacggctggcggagaagcagaaa
cagcaacagaactcgcagattggcgcggtgccagaaaaactcagtttcaaggagaagatg
aaaatgttcgcaatggaaaccggtgaggacggcacgccgagggacaaggtaaagatctcg
cgcgctcagcgcgaaatcgacaacatcggcagcccgctcaattccaataataacaataac
aacaacaacaacaacaacaacaacaacaataccactagcggcaataacaccaacaacaat
aggacctaa
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integrated database retrieval system
