Pseudomyrmex gracilis (graceful twig ant): 109858099
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Entry
109858099 CDS
T05003
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03030
DNA replication
pgc03410
Base excision repair
pgc03420
Nucleotide excision repair
pgc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109858099
03410 Base excision repair
109858099
03420 Nucleotide excision repair
109858099
03430 Mismatch repair
109858099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgc03032
]
109858099
03036 Chromosome and associated proteins [BR:
pgc03036
]
109858099
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109858099
DNA replication proteins [BR:
pgc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109858099
DNA Replication Termination Factors
ELG1-RFC complex
109858099
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109858099
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109858099
Check point factors
HRAD17(Rad24)-RFC complex
109858099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
RuvB_N
AAA_16
AAA_14
AAA_11
AAA_lid_RFC1
DUF815
AAA_5
AAA_19
ResIII
AAA_30
RCF1-5-like_lid
AAA_7
DEAD
AAA_24
AAA_assoc_2
nSTAND_NTPase5
AAA_13
PhoH
ATPase_2
Mg_chelatase
MTR4_beta-barrel
TIP49
nSTAND3
DUF1512
bpMoxR
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
109858099
NCBI-ProteinID:
XP_020290601
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MTSTEEQLANLPWVEKYRPRSLDELISHEMIIKTINKFIDENQLPHLLLYGPPGTGKTST
ILACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYRSAFKLIILDEADA
MTIDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFMPLEPEQIIPRLNHV
IKAENLKVTEDGKQALMTLSGGDMRKVISVLQSTWFAYGVVNEENVYNCVGHPLPRDINN
IVNWLLNEPYDTCYRKIQELKLNKGLALQDILTEVHLCVVKIDFPDSEFIDLLCKMADIE
KRLASGCRDAIQLNSLISAFYKIRDIET
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctaccgaagaacaactagcaaacttaccctgggtcgagaaatatcgccccagg
agtttggatgaactcatttctcacgagatgataataaaaacgataaacaagtttatcgat
gagaatcagttgccacatcttctcttgtacggaccacctgggacaggaaagaccagcact
atactggcttgtgctcgtaaactttatactcccgctcagtttaattcaatggtgttggaa
ttaaatgcctctgacgacagaggcataggtattgtacgaggtcaaatcctaagctttgcc
agtacagggaccatgtacagatctgcgttcaagttgattattctggacgaggcagatgcc
atgacgatcgatgctcagaatgcgctcagaagaattattgagaagtacacggacaatgtg
cgcttctgcattatatgtaactacctcagcaagatcatcccagctttgcagtctcgttgt
accagattcagatttatgccactggaaccagagcaaataatcccaagattaaaccatgtc
atcaaggctgaaaatctaaaggttacggaggacggaaagcaagcattgatgaccctgagc
ggcggcgatatgagaaaagtaataagcgtgcttcagagcacatggtttgcttacggcgtg
gtgaacgaagagaacgtgtataactgtgttgggcatcctttgccgcgtgacataaataac
attgtgaactggttgctgaacgagccttacgacacgtgttacagaaaaattcaagagctg
aagctcaacaaaggactcgcgttgcaagatatactaacggaggttcacctgtgtgtagtt
aaaattgattttcccgattcggagtttatcgatttgttgtgcaaaatggcagatatagag
aaaagactggcttccggatgtcgcgacgctattcaactgaactcgctcatatccgcgttc
tacaaaattcgcgatatcgaaacgtga
DBGET
integrated database retrieval system
