Pseudomyrmex gracilis (graceful twig ant): 109858409
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Entry
109858409 CDS
T05003
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109858409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109858409
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109858409
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109858409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109858409
NCBI-ProteinID:
XP_020291207
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANSSLTSRTVSGGGGLNASTLTGHVTPTSGMFSGSSASTSSTVNSAV
VATNVYPGASGSGGGQNSHQQQQQLSPMGSRGLFGQRAFTDRRTMPALGASNPMGSMGSF
GIPPSRNYGSQGAVNNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSVSGDKNISVGLGPEIGQD
VLQANRGPGPEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGIVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYTKLESRPHLPANFHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgagcaaccgccacgcagtattgcgaactcaagtcttacttca
cgtacagtcagcggaggggggggtttaaacgcttcgaccctcacgggtcatgttacgcct
acctcgggcatgttctcaggctcatctgcaagcacatcgagtactgtcaattcagcggta
gttgccactaacgtttatcctggagcatcgggctccggcggcggacagaacagtcatcag
caacagcagcaactctctcctatgggcagcagagggctgtttgggcagagagcttttacc
gacagacgtacgatgcctgctcttggagcttcaaatccaatgggtagtatgggcagtttt
ggaatacctccaagtcgtaattacggatctcaaggtgcggttaacaatttccactctgtt
tttgggagtggaggtggtggagacacgagtactccacctctgttagatctctcggaattt
ccctccctaacgaatagaggtcaaggtgattctatgccgcaacctagtcctatgccagga
aaacagccttatgttggaatggtaaaacaaccaacatccgaatcgagcgaatttactatg
agctcggaagactttcctgcattaccaggtacacagaaccgagaaggtccgtcacctggt
ggcagcgtatctggtgataaaaatatatctgtaggacttggtccagaaatcggacaggat
gtgttgcaggcaaacagaggtcctggccctgaaaagtctcagtcttctaaaagaggcatc
caaacgtcgcctgatggcaaagtaacgaatatacctgctagtatggtgaaggatcagttt
ggcatggtcggacttttgacatttattagagcagcggagacagatccaaacctagtgtca
ctggcgctaggccaagatcttactgcgttaggattgaatttgaattcacctgaaaatctt
taccagaattttggtggtccctgggcggaaacaccttgtcgaccgcaggatatcgatttt
cacgtaccaccggagtatcttataaatgctgcaatcagggataagctagcgccagttaaa
ctaaatcgatataaagatgatctactgttttatatgttttatacaaatgttggagatgta
ttgcaattagccgcggcggcggaattgtacagcagagaatggcgatatcatatggaggag
aaggtatggataacgcaagcacctggtttagggatagtagaaaagacttcgacatacgaa
cgtggtacttattattattttgatgcacaaaactggagaaaggtagctaaggaattccat
ttggattatacaaaactagaaagtagacctcatcttcctgcgaactttcaccaaactcag
ccttga
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