Pseudomyrmex gracilis (graceful twig ant): 109858564
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Entry
109858564 CDS
T05003
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109858564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109858564
Transcription factors [BR:
pgc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
109858564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
109858564
NCBI-ProteinID:
XP_020291553
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MTFRTIVAINRFKSFHRADKATNIRTILIYLRLIIQGATDKNLARLSKRLCRRKCRLIGD
QLHWIGCALYVACRKSSTPTVGRPGANVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMA
NMPQDFRARIEKLEGNFSVSMVIFKKYQPIFNDIFKDPKEDIRPSRSRRHKAVPCTPARV
FEFCWTLFICIKGGISDISDDLVNSYHLLLVCCDLIYSNALLANRRDLLNPNFPGLPADF
NNENYTIPQTAECILSLLCERHEAIPIEAKVIKEYHVKNYINKLFDERILRGDQSNFSGI
LEALNFDANSKAINKAYEQRVLSVGDLDERIFLAEWRRINLRNISNLDGDIKLKGHDASE
NIGSPTQMMSIDDFHERLQIKREQNAGIQYPALLTPLTGRKYLRSKDITNITPVTTATQS
VIKLQALIAGQSAPSEDLLQMLSKCSHEVKVETKVKQLGEQFCACYNNNAANVNDGSTSD
FGRMRLVMGETLFYKLLEMILNDEKRKKPNYDVTNLLSNELFIQCLFACCLEIVIYSYKS
NDKVFPWILKALNLDAYYFYKVIEIIVRTEDQLSRDVVKHLNQIEEKILESLAWQSDSPL
WQTIESLCAKDGVPSCEEVSLPGTLETVDPNAPGQPVLRRMAIDRDRTHHDVQQSPISSA
SERFQSPIASNVAKKRLFGDTRVTGQSVLRVGQSLLSTTSRVLLDGQRILLLPDQIVPKS
SASQASNTPVLPVQATNKDMTKPKRTGSVALFFRKFYNLACVRMQDLCNSLEISDTDKKK
IWTIFEYSIKERTELMKDRHLDQILMCAIYVICKLVKMEKNSFTEIMRCYRFQPQAQSHI
YRSVLIGKSSTDNDSKGIDNEKSDDKRTSEENVTPPTPTNMAGTSQNFDGEIRGDLIKFY
NTVYVPQVKEFANRFGSARGSVMNLSLSPLPKGKAAANSPVRRVTGSIMTRTLDPKAISA
SPAPQLSYCFSRSPAKDLEAINKMMISVDPKKSVGKRLLSDDTDVEMTEASSPNKKTTAF
VARKLEHIIGERRTQNQ
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcgcactatcgttgcgataaatcgctttaaatcatttcatcgcgctgataaa
gcaaccaacattcggacgattctcatatatttgcgactaattattcaaggcgcgacagac
aaaaatttggcgcgtttatcgaaaagattgtgtcgcaggaaatgtcgattaattggagat
caattacattggattggatgtgccttatatgtggcttgtagaaaatcttctacacccaca
gtaggaagaccaggtgctaatgtagaaggcaactgtgtctctctgacacgccttttacaa
ttgtgtaatcttccattgatacagttcttcacaaagagcaaatcatgggcggacatggcc
aatatgccacaagatttccgtgctagaatagaaaagttggagggaaatttttcagtgtcc
atggtaatatttaagaagtatcaaccaatattcaatgatatattcaaagatccaaaagaa
gatattagaccatccagatctagaagacacaaagcagtgccctgtactcctgctagagtc
tttgaattctgttggacactattcatatgcataaaaggtggaatttctgatatttcggat
gatcttgttaactcttatcatcttttattggtctgctgtgatctcatatatagcaacgct
ctattagctaatagaagagatttgctaaatcctaactttcctggcttgccagctgatttt
aacaacgagaattatacaataccacaaacagctgaatgtattcttagtttgttatgtgaa
cgtcacgaagctattcctattgaagctaaagttataaaagagtatcatgtgaaaaattat
atcaacaaattatttgacgagagaattttacgtggtgatcagtctaatttttctggtata
ttggaggcattaaattttgatgccaacagcaaagccattaacaaggcttatgaacaacgt
gtgctgagtgtcggggacttggatgagagaattttcttagctgaatggagaagaataaat
ttgagaaacatatcaaatttggatggagatataaaattgaaaggtcatgacgctagcgaa
aatatcggttcccctacgcaaatgatgagcattgacgacttccacgaacgattgcagata
aaaagagaacaaaatgctggaatacagtatccggcattgctcacaccactaactggtcgt
aaatatcttcgatcaaaggatataactaatataacgccagtaactacagcgacgcaaagt
gtaattaaattacaagctttaatagctgggcaatctgcgccaagcgaagacttgttacaa
atgctgagcaagtgttctcatgaagttaaagttgagacaaaagttaaacagcttggtgaa
caattttgcgcttgttataataacaatgccgctaacgttaatgatggttcgacatccgat
tttggaaggatgcgtcttgtcatgggagaaactctattttacaaacttttagaaatgatt
ctaaatgacgaaaagcgcaagaaaccaaattacgatgtaactaatcttttatcaaatgag
cttttcattcagtgcttgtttgcctgttgtctcgaaatagttatatattcgtataaaagt
aacgacaaagtattcccgtggatattaaaagctttaaatctagatgcttactatttctat
aaagtcatagaaattatagtaagaactgaagatcaattgtcacgagatgtggttaaacac
ttgaatcagattgaggaaaagattctagaatcattggcttggcagagcgacagtcctctg
tggcaaactattgagtctttatgcgctaaagatggtgtgccaagttgtgaagaagtttct
ttgcccggtactttagaaactgttgatcctaacgcgcctggccaacctgtattacgacgg
atggcaatagaccgagaccgtacccatcatgacgttcaacagagtccgatttcatctgca
tcggaaagatttcagtctccaatcgcatctaatgtagcgaagaaacgattattcggcgac
accagagttactggtcagagtgttttgcgagtcggtcaaagtttattgtctactactagt
agagtattattagacggccaaaggatactcttgctgccggatcaaattgttccgaaatct
tcggcctcacaagcgtcgaatactcctgtactacccgtacaagcaacgaataaagatatg
accaagccgaaacgaacaggttctgtcgcactattttttcgaaaattttacaatctcgcg
tgtgtgcgtatgcaagatttgtgcaattcattggagatatcagatactgataaaaaaaaa
atctggacaattttcgaatactccatcaaggaacgtactgagttgatgaaggatcgacat
cttgatcagatcctgatgtgtgcaatttatgtaatatgtaagctagtgaagatggaaaag
aactcgtttaccgagattatgcgatgttatcgttttcaacctcaagcacagtctcatatc
tatagatcagtccttattggaaaaagttccactgacaacgattcgaaaggaatcgataat
gaaaaatcagatgataagcgcacatcagaagagaatgtgactccaccgacaccgacaaac
atggccggaacatcacagaattttgacggggaaatacgtggtgatttaatcaaattttac
aacactgtatatgtaccgcaagtcaaggaatttgcgaatagatttggatcagctcgcggc
agtgttatgaatctctctttgagtcctttaccgaaaggaaaagcagctgctaattctcca
gtaaggcgtgttactggtagtatcatgacacgtactctcgatccgaaggctattagtgca
tcaccagcgccacaattgagttattgttttagtcgtagtcctgcaaaggatttagaggct
atcaataaaatgatgatatctgtagatccaaaaaagagtgtaggaaagcgattgctatcc
gatgacacggatgtagaaatgacagaggcatcatctccaaataagaagactacagctttt
gttgcacggaaattagagcatattattggagaacgacgaacgcaaaatcaataa
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