Pseudomyrmex gracilis (graceful twig ant): 109859111
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Entry
109859111 CDS
T05003
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgc03009
]
109859111
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109859111
Ribosome biogenesis [BR:
pgc03009
]
Eukaryotic type
90S particles
Helicases
109859111
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109859111
NCBI-ProteinID:
XP_020292612
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSMRALYFVLTLARVYLFPQICYLCITHMDAHDIFKILAKGCKFDVKRFRRDAELFGLVK
PSKHDIKIKEENIPEEEEASEPLVVENNRKRKCEERDDNTNNGIIMFDGESTSKNESVPA
KKQKKTKTADKIMKLEQEKINHLRNLNRISVTGTHVPKLILEFDELRINYQVSENLLNNM
KTCGYMYPTPIQKQAIPVMLENRQILACAPTGSGKTAAFLLPIIHSLQGPQKKGFRAVIL
NPTRELAKQTYREALRLSHGYDFRIHIINKINQAKYGPSSSQQFDILITTPKRLVFLLNQ
DPPAISLNNVEWLIVDEADKLFEEGIRGFRKQLEEISRACTNPYLRRGMFSATNTPAVSK
WCRTNMKRLVTVTVGHRNAAADTVEQKLVFVGWESGKLLELRNIIQKGITPPVLIFVQSK
ERGQKLFKELIYDGIYVDVIHSDRTMTERDNIVRGFREGKIWVLICTELMGRGIDFKGVN
LVINYDFPPSAISYIHRIGRTGRAGHKGKAITFFTIEDKENLRSIAAIMRESGCEVPEYI
LAMKKRSKKKQFKDQIMASPRKKAPTAPSAQQRKQKKQSKKSKETDMQVND
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcgcgctttgtacttcgttttaacgcttgcacgtgtttacttgtttcctcaa
atttgttatttgtgtattacacacatggatgctcacgatatttttaaaatactcgcgaaa
ggctgtaaatttgatgttaagcgttttcgaagagatgcagaattatttggattggtaaaa
ccaagtaaacatgacataaagattaaggaagaaaacataccggaagaagaggaagcgtca
gaaccacttgttgtagaaaataacagaaaacgaaaatgtgaagaaagagatgacaacaca
aataatggaataattatgttcgacggagagtcaacatcaaagaatgaaagtgttccagct
aagaaacagaaaaagactaaaactgctgataaaataatgaaactagagcaagaaaagata
aatcacttgagaaatttgaatcgcatttcagtcactggtactcatgtacctaagttaata
ctagagtttgatgaattgagaataaactaccaggtatcagaaaatctattgaacaatatg
aaaacctgtggatatatgtatccaacaccaatacagaaacaagcaataccagttatgttg
gagaatagacaaatacttgcttgcgctccaacgggatcaggaaaaactgcagcatttttg
ctacctataattcacagtttacaaggaccgcaaaaaaaaggttttcgtgctgttatttta
aaccctacgagagagttagccaaacaaacatatagagaagctttacgactaagtcatggt
tatgattttagaattcatattattaacaaaataaatcaagccaaatacggaccatcaagt
tcacaacaatttgatattttaatcactactccaaagcggctagtctttcttctaaatcaa
gatccaccagctatttcattaaacaatgtagagtggttaattgttgatgaagcggataaa
ctattcgaagaaggtatacgcggatttcgaaaacagttggaagaaatttcgagagcttgc
accaatccatatttacgtcgaggtatgttcagtgctacaaatactcccgcagtatccaag
tggtgtcgtactaacatgaagagacttgtaacagtaacagttggacacagaaatgcagct
gcagacacagtagaacaaaaactcgtatttgttggctgggaaagtggtaaattactggaa
cttagaaatattattcagaagggtataactccgcctgttttaatatttgtacaaagtaaa
gaacggggtcagaaactcttcaaagagctcatttatgacggtatctacgtcgatgttatt
cactctgacagaacaatgacggagagagacaacattgtacgtggttttagagaaggaaaa
atttgggttctgatttgcaccgagttgatgggcagaggcatagattttaaaggtgtaaat
cttgttataaattatgatttcccgccgtccgctatctcttacatccacaggataggtcgt
acaggtcgtgccggtcacaaaggaaaagctataacgtttttcactatagaggacaaagaa
aatttacgaagtatcgcggcgattatgcgcgagtccggatgcgaagtaccggaatatata
ctggccatgaagaagcgcagcaagaagaaacagtttaaggatcagatcatggcgtcacca
cgcaaaaaagcacccaccgcgcccagcgcacaacaacgcaagcagaaaaagcaaagcaaa
aagtcgaaagaaacagacatgcaagtaaacgattga
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