Pseudomyrmex gracilis (graceful twig ant): 109859566
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Entry
109859566 CDS
T05003
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109859566
09122 Translation
03013 Nucleocytoplasmic transport
109859566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109859566
03041 Spliceosome [BR:
pgc03041
]
109859566
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109859566
Spliceosome [BR:
pgc03041
]
Complex C
Other components
EJC/TREX
109859566
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109859566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
109859566
NCBI-ProteinID:
XP_020293512
LinkDB
All DBs
Position
Unknown
AA seq
1430 aa
AA seq
DB search
MASKVWHTELWKTWDKHGRNDFLKLFKHKFKEGNTSEWRRGLYELISNGVHGNIKKDSVV
QTLGELTNLGGAIPSTIVDIFTLIDVEAQNEERNNFYHIVKESEKFLTDRILKERLEIET
LQDVGTLKNKNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERPDTEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
INATPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIISDHEQAMKLAKEYVRKLSVIST
KDKEDVAEEKDNAQDKYSSNQKFGLCEALLEIGAWEVAQNLFNRLPDYCLTDQRPIALAL
CKMIQSLIEPAYRKYCIVSPKLPGRKVPPLKSFLAPPSIYELNDIHDRLLPMLIVLGPNL
HHDPILMYKVMRLCYAAIKHCPVDASKQLINKEDSNLYYDVLTILDVALLPSLSFMDCNC
CVAEELWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIK
PVGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAG
ADRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEI
VQKMAGIEAAEEMTCDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEHDLAVAL
CLLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHS
MLQDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAAQTVMAP
VAQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREISKIKQLAAQSADSKDM
TVSKGKKEQERYTTLIEKLQDEKKKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQ
FLQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEA
NRYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVC
HKWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERG
QRQDLHVLATSYSGQLKAKTPSMIRESDFHHVGDKAGKVQDTTNSDTNEKVSNGVAAKEV
NNGDTRPEKENKEQREKRSSSNQTHQENSEKLRKKDDNKDVIDAKEKYMKKDEVKDDDDK
KDRKYYKEEHYYSSSGDNLDRDLSSVSNSSAGSGPTQEGPERVSDAKRRKVENTPKQEGR
RAEAVLDKKERSSKGKTRDEQKELRREKKQGRKRDRADESIAATEQKRRKDDERAKSTHQ
NGDIPEHREKHHYSKEKSPYTKDRPHEREGRESRDKQSNARRKLFDMILN
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagtatggcatacagaattgtggaagacatgggataagcatggaagaaac
gatttcctcaagctattcaagcacaaatttaaggaaggcaacacgtcagaatggcgacga
gggttatacgaattaatatcaaatggggtccatgggaacataaagaaggacagtgtggtt
cagacattaggtgaactcacgaacttgggtggtgcaataccatcaacaatagtagacata
tttactttaattgatgtagaagcgcaaaatgaagaaagaaacaacttttatcacattgtg
aaagaatctgaaaagtttttaactgataggatattgaaagaacggttagagattgaaact
ttgcaagatgtgggaactttgaaaaacaaaaatttccaaacaaagtttataaaagtaaag
acaaaattatattacaagcagagaaaatttaatttatttcgcgaagagagcgaaggttat
tccaaacttattgtagaattaaatcaggaaagaccggatactgaggtcgcttcgacattg
gaaattgttaaatctctcattggttatttcaaccttgaccctaatagagtactcgatatt
ttattagagacctttgaaaatcgacctcaagacgatgctctatttattcccttaatacgt
tcatacatgagcgatcaacaggtactctgcgaggtgttgggattcaagtactgctccacc
atcaacgccactccgttttcacttcaaaaagttaccgcactcatgctgcagcatggtgtg
attaaattggacgatatattaccttggcttgtaccagatgataaaacaatcatatcagat
cacgaacaagcaatgaagctagccaaggaatatgtgcgaaaattaagtgtgatctcaacg
aaggacaaggaagacgttgccgaagaaaaggacaatgcacaagacaaatattcgagcaat
caaaaatttggattatgcgaagctcttttggaaatcggagcttgggaggtggcgcaaaat
ttatttaatcgtttgccagactactgtcttacggatcagcgtcccatagctttagcattg
tgtaaaatgattcaatctcttattgagccagcgtacaggaaatattgcatcgtttcgcca
aaattgccgggtcgtaaagtgcctcctttgaaaagctttctcgcgccaccatcgatatac
gaattgaacgacattcatgatcgtttgttgccaatgttgatagtgctcggaccaaacttg
catcatgatcctattctaatgtacaaagtgatgaggctgtgctacgctgccatcaagcat
tgcccggtcgatgccagcaagcaactaatcaacaaggaggattccaacctgtactacgat
gtgttgacgattctcgatgttgcattgttgccctcgctctcctttatggattgcaattgc
tgcgtcgccgaggaactgtggaacattctcaagtactatccctatcagaaccgttactgt
ttgtacgcgcgatggaaaaacgacacgccattacagcacgccgctctgttgcgaaaacgt
gcggatgctcagaagaagatcaagtcgattatgaaacgcgtaagcaaggagacgatcaaa
ccggttggccgatcgataggcaaactaactcattcctcgcccggtgttttgttcgattat
gttctaatacagatccagttgtacgacaacctaataggacctgtagtggattccttgaag
tacttgacaaatatttcgtatgacgtgttaggatattgtcttgtagaagcgttggcgggt
gctgacagggatagatttaaacacgatggcaccagcatatctttgtggttgcagtctttg
gcttcgttttgtggagcaatatttaaaaagtataacatcgaattaacagggttgttgcag
tatgtagcaaatcaactcaaagctcaaaagagcctagatctattgatattgaaagagata
gtacaaaaaatggctggtatcgaagcagccgaggaaatgacgtgcgatcaattggacgca
atggcgggaggcgatctgttaaaaaatgaggccggttacttcagtcaagtacgcaacacg
aaaaagtcttctcaacgtttgaaggaagctctcgctgaacatgatctcgcggttgctctg
tgtttattaatggcacaacagaaacattgcgtcgtttacagagaaacagataaatctcat
ctaaaactcgttggcaagttgtacgatcagtgtcaggatacgcttgtgcaatttggaaca
ttcttgggctcgactatgacggtggatgagtacgtggagcgattgccatcgattcattct
atgcttcaggacaatcacatacacgcggacgtcgcatttttcctagcaaggccaatgttt
gcacacgctataaatataaaatacgatgcccttcgtaaagctgatccaaattacaaaaag
atgtctacagccatgaagcaattaaagtacgcggaagctgcgcaaactgttatggcacct
gtcgctcaatccgttagacctttacatcctctgaaagtatgggaagatatttcgccgcaa
tttttagtcacattttggtctctgtcgatgtacgatttgtacgtgccggttgaaagctat
caaagagaaattagcaaaataaaacagctcgccgcgcaaagtgctgattccaaagacatg
actgtaagtaaaggcaaaaaggaacaagaaaggtacaccactctcattgagaagttgcaa
gacgagaagaaaaagcaagaggaacacgtcgagaaggtctttgcgtacttgaggcaagag
aaagatacatggtttttatcgcgaagcgccaaatctgcgaagaacgagacgataacgcaa
tttttgcagttgtgcctattcccgcgatgtacattcacaactgtagacgcgatgtattgc
gcgaaatttgtacataccattcactcactaaagactgcaaatttttcaactctgctttgc
tacgatcgtcttttctgtgatattacatattcagtcacctcgtgtacagagaacgaagca
aatcgatatggcaggtttttgtgcgccatgctggaaactgtgatgagatggcattccgaa
aaagccatattcgataaggaatgcagcaattatccaggatttgtgaccaagtttcgtgtt
agcaatcaattttccgaggcaaacgatatggttggatttgaaaattacagacacgtgtgt
cacaagtggcattacaagatcacgaaggccattgtagtgtgtctagattctaaagattac
gttcaaataagaaattctttgataatattgatcaagatattgccacattttcctgttctg
gcgaaactttctcaaattctcgaacggaaagtggaaaaagtgagagaagaggagcgcggt
cagcgtcaggatttgcatgttttagctacgtcgtatagcggacaactaaaagccaaaacg
cccagtatgatacgagaatcagattttcatcacgttggcgacaaggctggaaaggtgcaa
gatactacgaatagcgatacgaatgaaaaagttagcaatggagtggcggcgaaagaagtt
aacaacggggacacgcggccagaaaaagagaacaaggaacagcgagaaaaacgaagttca
tccaatcaaactcatcaagaaaactccgagaaattaagaaagaaagacgataataaggat
gttatagacgcgaaagagaaatatatgaagaaagacgaggtgaaagatgatgacgataaa
aaggatcgcaagtactataaggaagagcactattatagcagtagcggagacaatttagat
cgagatctttccagtgtttcaaatagtagcgctggttcaggaccaacgcaagaaggtccc
gaaagagtttcagatgcaaaaaggagaaaagtagaaaacactccgaaacaggaaggaaga
cgcgcggaagctgttcttgataaaaaagaacgttccagcaaagggaaaacacgcgacgag
caaaaggagttgcgtagggaaaagaaacagggacgaaaacgggatcgtgcagacgaatca
atagcagccactgaacaaaaacggagaaaagatgatgagagagctaaaagcactcatcag
aacggcgacattcctgaacatagagaaaagcatcattacagtaaggaaaaatctccatat
acgaaggatcgtcctcacgaacgcgagggacgggaaagccgtgataaacaatctaatgcg
cgaagaaaattgttcgatatgatccttaactga
DBGET
integrated database retrieval system
