KEGG   Pseudomyrmex gracilis (graceful twig ant): 109859887
Entry
109859887         CDS       T05003                                 
Name
(RefSeq) roquin-2 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pgc03000]
    109859887
   04121 Ubiquitin system [BR:pgc04121]
    109859887
Transcription factors [BR:pgc03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    109859887
Ubiquitin system [BR:pgc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109859887
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-RING_2 zf-C3HC4 zf-C3HC4_4 Prok-RING_4 zf_CCCH_4 Vesi_VP2 Lreu_0056_like zf-C3HC4_2 MAP6 zf-RING_4
Other DBs
NCBI-GeneID: 109859887
NCBI-ProteinID: XP_020294170
LinkDB
Position
Unknown
AA seq 982 aa
MPIQAPQWTEFLSCPICCHDFDATVRGPVSLGCGHTICRACLANLHRKQCPFDQSVINTD
VERLPLNEALLQLLGNPISAVTALSTSLSNQQQNYQQLLPVDQHANYLRAKSCIEELALY
LKPCQTSGINIGSGGAGLVSRPMQRKLVTLLGCQLVEPEGRARALRAARSLGERTVTELI
LQHQNPQQLSANLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRL
EPHFPQASKTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQI
ATEAGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQL
SGLRPQLELLAAIDPSPETEPPSLAECRAALEAVKIVVAALVDFVRQHGGCSGPSGSNRK
SATQDNGGNGPGGGLSSGQTAGKYKVSMCRDLALRGTCPRSNSCTFAHSDTELDKYRSKN
RKLSVKNSSHIDTKSEKSSKVFNKQNGDLITYHSTKIQDRETVPVAVQHSTNISTNLENN
LIDSLTSTYMLPAASPNLSHLGVCSVKGGTVIDNGGPPAVHCSGHFIMSPGPAVDYGSSL
RASTNLGVWDTSQVAPANITNEKKQRTAKSMLAMLLQRRMEILNQLETIVGKQQQQQAMS
SQIKTNYNLQQGSDLSLGTSNNYSIWAAANNFRYPSGTDPSPPAPHLVDDDGPFVSPLDA
SSITSSLSSVNNHGPISRLSKNLIRSPCNGALQHLTSFYNEGIGPTTAPPLSPAFRTSSS
LTPWYYGNQSYTTSASPTGGLNGSFVDDNYVNLSRNIISPESQSSQFSRSECMSKELILE
SQKVKQQLRHLEKKINDLKLATQGATTFFTAGERLAQLAELRMIEADIRERERDVQNWSN
SYVGDTGTTTCPWIQSSNNWLSNQEYNQNYKTEEEEDTYEAGIANDMRELELRWEFELRE
QEKHWSSGSEENTITAITSKNK
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgccgattcaggcaccacagtggactgaattcctttcgtgtccaatctgttgtcatgat
tttgatgcgactgtacgaggtcctgtatcactcggctgtggccataccatatgtcgagca
tgtcttgccaatctgcatcgcaaacaatgcccttttgatcagagtgtcattaacactgat
gtcgaaagactgccactaaatgaggcactgctgcaattgttgggcaatcctatttctgct
gttactgctttgtcgacatccttgtcgaatcagcagcaaaattaccagcagttattacca
gttgatcaacatgctaattatctgcgagccaaaagttgcattgaggagctcgctctttac
ctaaaaccatgtcaaacttctggtatcaacattgggagtggaggtgcaggattggtgtcc
cggccaatgcagcgcaaattagtgacattgctaggttgtcagcttgtggaacccgaaggt
agagcgcgcgcgttacgtgctgctcgcagccttggtgaacgcactgtcactgaacttata
ttgcagcaccagaatccacagcagctcagtgccaatctttgggcagctgtacgtgcgcga
ggctgtcagtttctcgggccagctatgcaagaagaagttcttaaactcgtattactggca
ttagaagacggttcggcattatcgcgcaaagtgcttgtgatgtttgtggtgcaacgctta
gagccacattttccccaagctagtaaaaccagtatcggccatgtggtacaactgctatat
cgggcgagctgtttcaaggtatcaaaacgtgaaggcgattcatcactgatgcaactaaag
gaggaatttcgcacttacgaggctttgagacgagaacatgacgcgcaaattgtacagatt
gctacggaagcgggtttgcgtattgcacctgaccagtggtcggcgttactttatggcgac
accgctcacaagtctcacatgcagagcattatcgacaaattacagactccgcagtcgttt
gcgcagagtgttcaagaacttgtgatagcactacagcgtactcccgatcctggtcaattg
agcggtcttaggccacagttagaattactggccgctattgatcctagtccagaaacagaa
ccaccgagtttggccgagtgtcgggcggctttagaagccgtaaaaatagtagttgctgca
ttggttgacttcgtgcgacagcacggaggttgcagcggtcctagtggcagcaatcgaaaa
tcagcaacgcaagataacggaggtaatgggcccggtggtggtctaagttcaggtcagaca
gccggaaaatataaagtcagtatgtgtagagatttagccctgcgtggtacatgtccgcga
tccaacagttgcacctttgcccacagcgacaccgaacttgacaaatacaggtcaaaaaat
cgcaagttaagcgtcaaaaattcaagtcacatagacacgaagagtgaaaaaagcagtaag
gtttttaacaagcagaacggcgatttaatcacttatcattccacgaaaatacaggacaga
gaaactgttccagttgcggtgcaacattcgacaaacatttcaactaatctagaaaataat
ttaatcgactcactgacatcgacttacatgctgcctgcagcttctccaaatttgtcacat
cttggagtgtgttctgtaaaaggaggaaccgtaatagacaacggcggaccccctgccgtt
cattgctccggacatttcataatgtctccaggacccgccgttgattacggatcttcattg
agagcttcaacaaatctcggagtgtgggatacttcgcaagttgcgccggcgaatataacg
aacgagaagaagcaacgaacggcgaagagtatgttagcgatgttgctgcaacgcagaatg
gagattctaaatcaattggaaacgatcgtgggcaaacaacaacagcaacaagcaatgtca
tcgcaaataaaaacgaattataatcttcagcagggaagtgacttgtctttgggtacatct
aacaattattcgatatgggccgctgcgaataacttccgctatccttccggaacagatccg
tcaccaccagctccgcatctagttgacgatgacggacctttcgtatctccgttagatgca
tcttccatcacatcttccctgtcgtcggtcaataatcatggacccatttcgagactgtct
aaaaatctgataaggtctccgtgcaacggagctttgcagcatcttacgagcttttataat
gagggaattggaccaactactgctcccccactgtctcctgcattcagaacatcaagttct
ctaactccttggtattacggtaatcaatcatacacaacatctgcgagtcctactggtggt
ctaaacggcagtttcgttgatgataattacgttaatctgagtcgcaatattatttcaccg
gaatcgcagtcgtcacaattttcgagatcggagtgcatgtcgaaggaattaattctcgaa
tcgcaaaaggtaaaacagcaactcagacatcttgagaagaagatcaatgatttaaagttg
gcaacgcaaggagctaccactttctttacagcgggagaacgtttggcgcaattagcagaa
ttgcgaatgatcgaagcagatattagggagagggaaagagatgtgcagaattggagtaac
tcatacgttggcgatactggcactaccacttgtccttggattcagtcttctaataattgg
ctatccaatcaggaatataatcaaaattataaaactgaagaagaagaggatacgtacgaa
gcgggcattgcaaatgatatgcgcgaactggagctgcgatgggagttcgaattgcgcgaa
caggagaagcactggtccagtgggagtgaagaaaacaccatcaccgccatcacttccaag
aataaataa

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