Pseudomyrmex gracilis (graceful twig ant): 109859911
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Entry
109859911 CDS
T05003
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109859911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109859911
Spliceosome [BR:
pgc03041
]
Complex A
U1 snRNP components
U1 related factors
109859911
Complex B
109859911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
HVO_2833_C
Spherulin4
Propep_M14
Motif
Other DBs
NCBI-GeneID:
109859911
NCBI-ProteinID:
XP_020294211
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MASNDGIPPPAAVTGFPPATPNITSSFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFTFPMTAAPPPEAGVVGTSPQIPAPGIPPPSPINSETTTAISVSAVEKKSDWSEHKAPD
GRTYYYNSVTKQSLWEKPDELKTPSELLLSQCPWKEYKSENGKVYYHNVTTKESRWTIPP
ELEELKTRIMAEEAAAAAAAAVASATNTTMVPVTMQHVSPNITNIPQTSTPEPGGKSMIE
QAMAATLAAINIPPPPTKTDEDSNSAMGSANDSRTSTPEPKLQFKDKKEAVEAFKELLRE
KEVPSNATWEQAVKLIQNDPRYPQLKKFSDRKSIFNSYKMQKLKEEREQERLRLKKAKED
LEQFLLESDRMTSTTKYYKCEEMFGNLEVWRAVGDSDRRDIYEDVIFNLAKREKEEAKQL
KKRNTKRLAQVLDTMTEVTYKTTWQEAQALLLQHPAFAEDADLLEMEKEDALIVFENHIR
QLEKDEEEEKECEKKRRKRQERKNRDGFIYLLDELHEQGKLTSMSLWVELYPMLSADLRF
SAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVCED
RKSATLDAGNVKLTYNLLLEKAEAREKERVKEEARKFKKLETGFKNLLKSLNVDYEMTWE
DVRPKIEEEPDFKAITLESERARIFKEYQHELEESCSHHHIRIKKKKAKKVKRKSRSRSH
SESEGSDKGLRRKQHKSPSVPSNGESSESETKKSKRKKSKKKRGRSHSRSDSRLPSSEDS
PERKRKEEKLRRSSIHSEGSVTENNDHHELSEDELEKQRAQLLRELQMQQEEN
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacgatggtattccaccacctgctgctgtgacaggattcccaccggcaacg
ccaaatatcacctctagctttgttccgcccattatgcccacagcacccttcatccctcct
cccagtttaccgccgggtcctccaggtataatgccacctcagttctctatacctccgcct
ggcttcacttttcccatgaccgctgcacctcctccagaggctggagtagtaggtacgtcg
ccgcagataccagcgccgggaattcctcctccgtcgcctatcaacagcgaaaccaccaca
gcgatatctgtgtccgctgtcgagaagaagagcgactggagcgagcacaaagccccggac
ggtagaacgtactattacaacagcgtcacgaaacagtcgttgtgggaaaaaccggacgaa
ctgaaaacacccagcgaattgttgttgtcgcaatgtccctggaaggaatacaagtcggag
aacgggaaagtgtattatcacaatgtgaccacgaaggagtccagatggacgattccgccg
gaattggaagagttgaagaccagaatcatggccgaagaggctgccgcggctgctgcggcg
gctgtagctagcgccacaaacaccactatggttcctgtaaccatgcaacacgtatcgcca
aatatcacaaacataccgcagaccagtacaccggaaccaggtggaaagtctatgatcgag
caggcaatggccgcaacactcgcagcgattaatattccgccaccgcccacgaagaccgac
gaggacagtaattccgcgatgggttcggccaatgacagtcgcaccagtacgcccgagccg
aagttgcaattcaaagataaaaaagaagcggttgaggctttcaaagagctgttgagggaa
aaggaggtgccgtctaatgccacgtgggaacaggcggtgaagttgattcaaaacgatccc
agatatccgcagttgaagaagttcagcgatcgcaaatcgatcttcaactcgtacaagatg
caaaagttgaaggaggaacgcgaacaggaaagactcagattgaagaaagccaaggaagat
ctggagcaattcctgttggagagcgacagaatgacaagtacgaccaagtactacaagtgc
gaggagatgttcggcaatctggaagtctggagagcagttggcgattcggatcgccgggac
atttacgaggacgttatcttcaatctggcgaaacgcgagaaggaggaggcgaaacagttg
aagaaacgaaataccaagagactggcacaggttctggacacgatgaccgaagtaacgtac
aagaccacgtggcaggaggcacaggcgttgttgctgcaacaccccgcgttcgcggaagac
gcggatttgctggagatggaaaaggaagacgctctgatcgtgtttgagaatcatatacgt
cagctggagaaggacgaggaggaagagaaagaatgcgagaagaaacgcagaaaacggcag
gagagaaaaaacagagacggttttatatacctgctagatgagcttcacgaacagggcaag
ctaacgtcaatgtcgctctgggtagaattatatccgatgctgtccgccgaccttcgattc
tcagctatgctgggacaatcgggctcgactcctctggacctcttcaaattctatgtcgag
gacctgaagtctcggtttcacgacgagaaaaagatcattcgcgaaatactgaaggacaag
aacttcgaggtgcaagtcaacacgaccttcgaagagtttgccacagttgtgtgcgaagac
cgcaagtcggccactctggacgcgggcaatgtcaagctgacgtacaacctgctgctggag
aaggccgaagcacgggaaaaggaacgagtcaaggaagaagccagaaagttcaagaagctg
gaaacgggattcaagaacttgctgaagtctctgaatgtcgactacgaaatgacgtgggaa
gacgttaggccaaagattgaggaagaaccggacttcaaggcgatcacgttggagagcgaa
agagcgcgaatattcaaggagtatcagcacgaactcgaggagagctgcagtcatcatcac
atcaggatcaagaagaaaaaggcgaaaaaggtgaaacgtaaatcgcgttcgcgttcgcac
agcgagtcggagggcagtgataaaggtttgagaagaaaacagcacaagtcacccagcgtg
cccagtaacggcgagagctccgagtcggagacgaagaagtccaagagaaagaagagtaag
aagaaaagaggccgcagtcattcccgctcggattcgagacttccgtcttccgaggattct
ccggaaagaaaacgaaaggaggagaagctcagacggtcctcgattcacagcgagggttcc
gttacggaaaacaacgatcatcacgaactgtccgaggacgagctggagaaacaaagggcg
cagctcttgcgcgagctacagatgcagcaagaggaaaactga
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