Pseudomyrmex gracilis (graceful twig ant): 109860500
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Entry
109860500 CDS
T05003
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgc03016
]
109860500
Enzymes [BR:
pgc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
109860500
Transfer RNA biogenesis [BR:
pgc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
109860500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
ApoB100_C
NPA
Motif
Other DBs
NCBI-GeneID:
109860500
NCBI-ProteinID:
XP_020295203
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MNTSDIIYLISSKNNVFIWNADDWLRLRRDHRIIGGLIGSFAKATRQDAFSGLPLLLSPD
EVTILIEKGIARLVECTSLEELPSESLKKKLQDYRDQLFEDQEKCLRENKKKQVMAFMDR
IVEGKKRKMLGMHTGKKNKNKMLDKKAQEAMDNIEINTQTLLEEEVAKLPKLKASEALIQ
THLAYPWSSRDNIKTVDWKYPFTATQKLKYKVYKNLWERGYYISNGEQFGGHFLAYMGDP
LMFHSQFIIQCRSKDEEISVVELMNQCRISCQVRKTFVFAIYCEKEDKVYYQSFQWAESK
ALQNS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatcggatattatatatctcatttcctcaaagaataatgtttttatatggaat
gctgatgattggctgagacttcgtcgcgaccacagaataattggcggattgataggttcc
tttgccaaagcaaccagacaagacgcattctccggtcttccattgcttttgagtccggac
gaagtaacgatattgattgagaaagggattgctcgtcttgtagaatgtacaagtctggag
gaactaccgtccgaatcattgaaaaagaagttacaggattacagagaccagttgttcgag
gaccaagagaaatgtttgagagaaaacaagaagaaacaggtcatggcgtttatggataga
atcgtggagggaaagaagcgcaagatgttaggtatgcatacaggcaaaaaaaataagaac
aagatgttagacaagaaggctcaggaagctatggataacatcgaaatcaacacacaaacc
ttgcttgaagaagaagtggctaagttaccgaaattgaaagcatctgaagcgctcattcag
acacacctggcatatccgtggtcttctagagacaatataaaaacagtagactggaaatat
ccgtttactgctactcaaaaattaaaatacaaagtgtacaaaaatctttgggaaagagga
tattacatctcaaacggagaacaatttggcggacattttttggcgtatatgggtgatccg
ttgatgtttcattcgcaatttataatacaatgcagaagcaaggacgaagagatatctgtt
gtagaactcatgaatcaatgtagaatcagttgtcaagtcaggaagacgtttgtattcgct
atatattgtgaaaaagaagacaaagtgtattatcagtcttttcagtgggcagaaagtaaa
gcacttcaaaatagctaa
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integrated database retrieval system
