Pseudomyrmex gracilis (graceful twig ant): 109860764
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Entry
109860764 CDS
T05003
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109860764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109860764
Spliceosome [BR:
pgc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109860764
Complex C
U5 SnRNP specific factors
109860764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
109860764
NCBI-ProteinID:
XP_020295637
LinkDB
All DBs
Position
Unknown
AA seq
2373 aa
AA seq
DB search
MSIPPYLLGPNPWATMMAQQQVQLAAAQAHAAQAAAHAQAAHHAHMQAMAGPPLPQMPKQ
PEVLSEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPAEHIRKIIRDHGDMSSRKY
RHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYI
AQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEEDE
SVASWFYEHKPLVGTKHVNGSTYRKWNLTLPQMATLYRLANQLLTDLVDQNFFYLFDLKS
FFTAKALNMAIPGGPKFEPLVKDSNTADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNN
MPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTIEPQIDDDEDFVLPG
EVQPFLQEIPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPVK
VRVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYN
MLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHV
QYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVG
KGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFD
LELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRY
VKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYIS
PEEAVAIFTTSVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQRE
ELGLIEQAYDNPHEALSRIKRHLLTQRAVKEVVIEFIDLYSHLISVYDVEPLEKITDAYL
DQYLWYEADKRRLFPPWVKPADTEPPPLLVYKWCQGINNLQDVWEVNEGECNVLLESKFE
KLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIAX
YYELVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRFS
ADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLP
RSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEITK
ERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRW
SKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRP
SLLADSKDVMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLL
IAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPY
LSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII
HTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRA
LHVNTERTKVVLKPDKTTITEPHHIWPSLSDDEWIKVEVQLKDLILADYGKKNNVNVASL
TQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSNY
ETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRA
QIAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPNTLPNHQYLKEMEPLGWIHTQP
NELPQLSPQDISTHARIMAENSIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQNT
DKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKFELQLANPK
EFYHEVHRPAHFLNFSSLEDGEGVGADREDMFA
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccaccatatctgctgggccctaatccatgggccactatgatggcccaacaa
caagtccagctagcagctgcccaagcacatgctgcacaagctgcagctcatgcacaagca
gctcatcatgctcatatgcaagcaatggctggaccaccattgcctcagatgcccaaacag
cctgaagtcttatctgaggacaaacttcaggagaaagcacaaaaatggcagcagttgcaa
tcaaagcgatttgcggagaaaagaaagtttggttttgtagatgctcaaaaagaagatatg
ccagctgaacatataagaaagattattagagatcatggtgatatgagcagtagaaaatat
cggcatgacaaacgtgtttatttaggagcattaaagtacatgccacatgcagttatgaaa
ttgttggaaaacatgcctatgccatgggaacaaataagagatgtgaaggtcttgtatcat
attacaggagctattacatttgtcaatgaaattccatgggttatagaacctgtatacata
gcacaatggggcacaatgtggattatgatgagacgggaaaaaagagatcgtaggcacttc
aagagaatgaggttcccaccttttgatgatgaagagcctcctctagattatgcggataac
gttttggatgttgagcctttagaagccatacaaattgaactcgattcagaagaagatgaa
tcggttgcatcatggttttatgaacataagccattggttggtactaaacatgttaatgga
tctacatatcggaaatggaacctgacgttgccacagatggccactctgtatcgattagct
aaccaattgttaactgatttggtggatcagaatttcttttatctctttgatcttaaatca
ttctttactgcaaaagctttaaatatggctattcccggaggaccaaaatttgaaccatta
gtgaaagattcaaatactgctgatgaagattggaatgaattcaatgatataaataagatt
attatcaggcagccgattagaacagaatacagaattgcatttccttatttgtacaataat
atgcctcattttgtgcatctttcatggtatcatgcaccaaacgttgtgtacataaaaacc
gaagatccagatttgcctgcgttctatttcgatccgttaattaatccaatttctcacaga
aattcgttgaaaacaatagagccgcaaatcgatgatgacgaagattttgttctgcctggt
gaagtgcaaccgtttttacaagaaatacccctttatacagataatacagcaaatggaata
gctcttttatgggcaccaaggccatttaacacccgttcgggaagaacaagaagagccata
gacattccgctggttaaatcatggtatagagaacattgtccgcctggtcagcctgtaaaa
gtacgagttagttatcaaaagctattgaaatacttcgtgctaaatgcattgaagcataga
ccaccgaaaccgcagaagaaacgctatcttttccgttccttcaaatcgaccaagtttttc
cagacaacaacgatcgactgggtggaggccggtttgcaagtatgccgtcaaggatacaat
atgttaaacttactgatacaccgaaaaaatctaaactatcttcatttggactacaatttc
aacttgaaacctgtcaagacgcttacaacaaaagaaaggaaaaaatcgcggtttggcaat
gctttccacttgtgccgagaaattcttcgtctaaccaaactcataatcgattctcacgtt
caatatcgattgaataacgtagacgcatttcaacttgctgatggattgcaatatatcttt
gcgcacgttggtcagttaactggcatgtatcgatacaagtataaactaatgcggcaaatc
agaatgtgcaaagacttgaaacatttgatttattatcgttttaataccggtccagttggt
aaaggacccggatgtggattttgggcgcccggttggcgtgtctggttgttcttcatgaga
ggtatcactcctcttctggaaagatggctaggtaatttgttgtcaagacagttcgaaggt
cgtcactcaaagggagttgcgaaaactgtcacaaaacaacgagtcgagtcacatttcgat
cttgaattacgagcgtctgtcatgcatgacatagtagacatgatgcccgaaggaataaag
caaaacaaagcacggacgattcttcaacatttaagtgaagcctggcgctgctggaaggca
aatatcccatggaaagtaccgggtttgccgattcctattgagaatatgatattacgttat
gtcaaaatgaaagccgactggtggaccaacacagctcattacaatcgagagagaattcga
cgtggtgcgacagtagacaagactgtctgcaaaaagaacctcggtcgcttgacacgtctt
tatttgaaggccgaacaggaacgacaacacaattacttgaaagatggtccgtatatatcg
cccgaagaagctgtggctatatttaccacttcggtacattggttagagtcgcgaagattt
gcaccaataccgtttccacctttatcttacaaacacgatacaaaactattaatattggct
ctggaacgtttgaaggaagcttacagtgttaaatccagactaaatcaaagtcaacgagaa
gaattgggtttgatagaacaagcatatgacaatccacacgaggcattgtcgagaatcaag
cgacatttgctcacgcagagagctgtcaaggaagtcgttattgaatttatagatctctac
agtcatttgatttctgtatacgacgtagaaccgctcgagaagattacagatgcctacttg
gatcagtatttgtggtacgaggcggacaagagacgactcttcccgccttgggtgaaaccg
gctgatacagaaccgccgccgctccttgtttacaagtggtgtcaaggtatcaacaatctt
caagatgtatgggaggtcaatgagggcgagtgcaacgtgttgcttgaatccaagttcgag
aagctgtacgaaaagatcgatcttacgctactcaatagattgttgcgactaatagtcgac
cataacatcgccgattatatgacggcaaagaacaatgttgtcattaattacaaggatatg
aatcacactaacagctatgggattatcagaggtctgcagtttgcgtcctttatcgcttag
tattacgaactagtgttggatctactggtactgggtctgcagcgagccagcgaaatggcc
ggtccgccgcaaatgccgaatgacttcttaacttttcaagatgttgcttccgaaacagcg
catcctattcgattatattgtcgctatgtcgatcgaatacatttgtttctgcgcttttcc
gctgacgaggcaagagaccttattcagcgatatcttaccgaacatcccgatccgaacaat
gaaaacattgtcggctacaacaataagaaatgctggccgcgagatgctcggatgagactg
atgaagcatgatgttaatctaggccgcgctgttttctgggatataaaaaatcgtttgcca
cgttccactactactattcaatgggagaatagtttcgtcagcgtctacagcaaagataat
cccaatttgctctttaatatgagcggatttgaatgcagaattttgcccaagtgtagaacg
actcatgaggagtttacgcaccgtgatggcgtctggaatcttcagaacgagattacgaaa
gaaagaactgcgcaatgctttttgcgcgtcgatgacgagagcttgcaacgttttcacaat
cgtgtcagacaaattttgatggcctcgggttcaactacgtttacaaaaattgtcaataaa
tggaataccgcgttaatcggtctgatgacttacttcagagaagctgtagtaaatacgcaa
gaattattggatctgttagtcaaatgcgagaacaagattcagacacgtatcaagattgga
ctcaactccaaaatgccttcgcgcttcccgcctgtcgttttttatactcctaaagaattg
ggaggtttgggaatgttatcgatgggtcatgtattgataccgcaatcggacttgagatgg
tcgaagcaaactgacgtaggcataacacattttcgttcgggtatgagtcacgatgaagac
caattaattccgaatttatatcgatatatacaaccttgggagtcagaatttattgactct
cagcgcgtctgggcggagtatgcattgaagagacaagaagccaacgctcagaatcgtaga
cttactttggaagatctcgaggatagttgggatcgcggcattcctaggatcaatactctg
ttccagaaggatcgacacacactggcgtacgacaaaggctggcgcattcgcacagaattc
aagcaataccaagtgctaaagcagaatccgttttggtggactcatcagcgtcacgatggc
aaactatggaatttgaacaactatcgaaccgatatgattcaggcgctcggtggtgtcgaa
ggaatcctcgagcatactcttttcaaaggtacttacttcccgacatgggaaggtctcttc
tgggaaaaagcttccggtttcgaggaatcgatgaaatataaaaagctgacaaacgcgcaa
cgttccggtctcaatcagattcctaatcgtcgtttcactttatggtggtcgcctacgatc
aatcgcgccaacgtctacgtcggtttccaggtgcaactagatctaacgggaatatttatg
cacggcaaaataccaactcttaagatttcgttgattcagatattccgcgctcatttgtgg
caaaaagttcacgaatccattgtgatggatctctgccaagtattcgatcaagaattggac
gcattggaaattgagactgttcagaaagaaacgattcatcctcgaaaatcttacaagatg
aactcatcgtgcgcggatatcttgcttttctccgcctacaaatggaacgtatctcgaccg
tcgcttcttgccgattccaaagatgtgatggacaacacaaccacgcagaagtattggatt
gacgttcagctaagatggggcgactacgactctcacgatattgagagatatgctcgcgcc
aagttcctggattacactacagacaatatgtctatctatccatcacccaccggtctttta
atagctatagatttggcgtacaacttgcacagcgcctatggcaattggtttcccggctgc
aagccgctaatacagcaagctatggcgaagattatgaaggcaaaccccgcattgtatgtc
ttgcgtgaacgcatccgtaaagcgttgcaactttactcatccgaacctacggagccttat
ctctcctcacagaactacggcgaactcttttccaatcagattatttggttcgtcgatgat
acaaatgtgtatcgcgtgacgattcataagacctttgagggtaacttgacaacaaaaccg
attaacggtgcaatctttatttttaatccacgcactggacaactcttcttaaaaattatt
cacacctctgtctgggccggacagaagcgtcttggtcagctagctaaatggaaaactgcc
gaagaagttgctgctcttattcgttcgttaccagtggaggaacagcccaagcagataatt
gttactaggaagggaatgttggacccattggaagtacacttactggatttccccaacata
gttatcaaaggatccgaactgcaattaccattccaagcatgtcttaaagtagaaaagttc
ggcgacttgattttgaaagcaaccgagccacagatggtgcttttcaatctttatgacgac
tggcttaagaccatttcatcttacactgcgttttcgaggctgattctcattcttcgcgct
ctacatgtgaatactgaacgaacaaaagtcgtgttaaagcccgataaaaccactataacc
gaaccgcatcatatatggccgtcgctgagtgacgatgagtggatcaaagtagaggtgcag
ctgaaagatttaatcctcgcggactatggcaaaaaaaacaatgtcaacgtcgcgtcactc
actcaatctgaaattcgtgatatcattcttggcatggagataagcgcgccatccgcgcaa
cgtcaacaaatcgccgagattgagaagcagactaaggaacagagccagctcactgccact
accacacgaacggtcaacaagcacggcgacgaaattataaccgcgactacgtctaattat
gagacgcaaacgttcagttcaaaaactgaatggcgagtgcgagctatctctgcgaccaat
cttcatcttagaacgaaccacatctatgtctcgtctgacgatatcaaggaaactggttat
acctatattttaccgaagaacgtactaaagaaatttgttacaatctctgatctgcgagcg
cagattgccggctatctgtatggaatcagtccgcctgataatcctcaggtaaaagaaatc
aggtgtattgtaatggcaccccaatggggaactcatcaaacggttcacttgccaaataca
ttacctaaccatcagtatttgaaggaaatggagccgctgggttggatacacacacagccc
aatgagctaccgcaactctcgccacaagatatatccactcacgcccgaatcatggcggag
aattccatttgggacggtgaaaaaaccatcgtcattacttgcagctttacacctggctcc
tgttctctcacagcgtataagctgacgccaagcggtttcgaatggggcaaacagaatacg
gacaaaggcaacaatccgaaaggttatctacccagtcattatgaaaaagtacagatgctt
ctgtccgatcgtttcctgggcttttttatggtgcctagtcaaggctcgtggaattacaat
tttatgggagtgagacacgatcctaacatgaaatttgagttgcaactggcaaacccgaaa
gagttttatcatgaggtgcatagaccggctcatttcctcaatttctcgagcttagaagat
ggcgaaggagttggggcagatcgagaagatatgtttgcgtaa
DBGET
integrated database retrieval system
