Pseudomyrmex gracilis (graceful twig ant): 109860940
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Entry
109860940 CDS
T05003
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109860940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109860940
Spliceosome [BR:
pgc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109860940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
109860940
NCBI-ProteinID:
XP_020295953
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSLADELLADLEENDDGDMLIEESEPNFLPTSVSKVIEEEIKVSTVRELAKLRDSEQLQK
VIIEIEKHSKIPRKSTDIIGPVESDPEYQLIVEANNMAVDIDNEIAIIHRFTRDKYSKRF
PELESLVVGPLEYLMTVRELGNDLDKAKNNEILQQFLTQATIMVVSVTASTTQGQLLTEE
EKEAICEACDMAVELNNYKLKIFEYVESRMAFIAPNLSIIVGASTAAKIMGVAGGLTKLS
NMPACNLLVLGSQKTTLSGFSQVTTLPHTGFIYYSDIVQETPPDLRRKAARLVAAKSMLA
ARVDACHESTDGHIGQMLREEIEKKLDKLQEPPPVKFVKPLPKPIDPGRKKRGGKRVRKM
KERYAITEFRKHANRMNFADIENDAYQEDLGYTRGTIGKAGTGRIRLPQIDEKTKVRISK
TLQKNLQKQQQWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKKVNEANAKYFSNT
AGFLKVKKN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagcggacgaactactcgccgatctcgaggaaaacgatgacggggatatgctc
atagaggaatcggaaccgaattttcttccaacttcggtttccaaagtcatagaagaagaa
ataaaggtgtctactgttcgagaattggccaagttacgggattcggaacaattgcaaaaa
gttataatagagattgaaaaacacagcaagataccgagaaagtcaactgacattatagga
cctgtcgagtctgatccggaatatcagttgatagttgaagctaataacatggcagttgat
attgataacgaaatagctattatacatagattcacaagagataagtattcaaaaagattt
ccagagttggaatctttagtagtagggccattagagtatttaatgactgttagagaattg
ggcaatgatctggacaaggccaagaacaatgagatactacaacagtttctcactcaagcc
actatcatggttgtttctgtgacagcctcaaccactcaaggacaattactaacagaggag
gaaaaagaagctatttgtgaagcttgtgacatggcggtggaattgaataattataaactg
aagatatttgaatatgtagaaagtagaatggcatttattgcgccaaatctatcgataatt
gtcggtgcatcaacagctgccaagataatgggtgtggcgggtggtctgacaaagctgtcc
aatatgccagcttgtaaccttctagtcttgggatctcaaaagaccacgctctctggattt
tcgcaagtcaccactttacctcacaccggattcatctattactcggatatcgtacaagaa
acacctccggatctacgaagaaaagcggcgaggctagtagcggctaagagcatgctggcg
gccagagtggacgcctgccacgagagcacggacggtcacatcggccagatgctacgcgag
gagattgaaaagaagctggacaagttgcaagagccaccgccggtgaagttcgtgaaaccg
ctgccgaaaccgatcgatcccggtcggaaaaaacgcggaggtaaacgcgtccgcaagatg
aaggagcgctacgcaatcaccgagttcagaaaacacgccaataggatgaacttcgcggac
attgaaaatgacgcctaccaagaggatctcggctacacgcgaggaacaatcggtaaggcc
ggcacgggtcgaatcagactgccacagatcgacgaaaagacgaaggtcagaatatctaag
acgcttcagaagaacctgcagaagcaacaacaatggggtgggagcactactgtcaaaaag
caagtctccggtaccgcttccagtgtcgctttcacacctttacaaggtcttgaaattgtc
aatccacaagctgcggagaagaaggtgaacgaggcaaatgcaaaatacttctctaacaca
gccggcttcttgaaagtcaagaaaaattaa
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