Pseudomyrmex gracilis (graceful twig ant): 109861409
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Entry
109861409 CDS
T05003
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109861409
04121 Ubiquitin system [BR:
pgc04121
]
109861409
Enzymes [BR:
pgc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109861409
Membrane trafficking [BR:
pgc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109861409
Ubiquitin system [BR:
pgc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109861409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
FAR1_N
zf-RING_Vps41
DUF8608
zf-RING_6
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
109861409
NCBI-ProteinID:
XP_020296632
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MAEAVVDGTPMSRFFCHKCSVEIERLLPNYTCPQCASGFIEELESSSNEGSSGMEVNSED
MSDVDVDILGYSSQRTDRDSDIIEMIMGLSNTYTNQQSNTNQQPSGANRNSMLGSRRRFR
SFQDGRRSTSSNRRRQENLQVPIEHFIQDFILNLSGAASLGHSVGQDTQPSVFNIRLFLG
NPGDYVWGRDGLDAIVTQLLNQMDGTGPPPLPRKQIDEIPTTTISQSQVDCKLQCSVCWE
DFKLGEPVRQLPCQHVYHAPCIVPWLELHGTCPICRQNLGNQNPGETTQDTANTLAGSSF
AALFRAANEANRTGQPISRTSSTSSSTSSSTE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgttgtagacgggactccgatgtcccgatttttttgccacaaatgcagt
gtcgaaattgagcgtttgttaccaaattacacatgtccgcaatgtgcaagtggtttcatt
gaagagctagaaagtagcagcaatgaaggaagttctggcatggaagttaatagtgaagat
atgagcgatgtggatgttgatatcttgggatattcctcacagcgcacagatcgtgattct
gatataatagaaatgataatgggattatcaaatacatatactaatcaacagtcaaatacc
aatcaacaaccaagtggtgctaatagaaacagtatgcttggaagtagaagaagatttcgt
tcttttcaagatggacgtcgcagcactagcagcaatcgtagaagacaagagaatctacaa
gtgcctatagagcattttatacaagattttattttgaatctatcaggagcagcaagtcta
ggccactctgtaggacaagatacccaaccatctgtattcaatattagactgttcttggga
aatcctggagattatgtatggggtcgtgatggattagatgctattgttacccaattattg
aatcaaatggatggtactggccctccaccattaccacgcaagcagattgatgaaatacct
accactacaatatcacaaagtcaagttgattgtaaacttcaatgttctgtttgttgggaa
gacttcaagttgggagaacctgtcagacaacttccttgtcaacatgtttatcatgcacct
tgtattgtaccctggttggaattgcacggaacatgtcctatctgcagacaaaatttagga
aatcaaaacccaggtgaaactactcaagatactgcaaacaccttagctgggtctagtttt
gccgctttatttagggcagcaaatgaagcaaatcgaacaggacaaccaatcagccgaaca
tcgtctacttcgtcatccacttcgtcatctactgagtag
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