KEGG   Pseudomyrmex gracilis (graceful twig ant): 109861491
Entry
109861491         CDS       T05003                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109861491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgc03400]
    109861491
Enzymes [BR:pgc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109861491
DNA repair and recombination proteins [BR:pgc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109861491
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C BRCT RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 109861491
NCBI-ProteinID: XP_020296754
LinkDB
Position
Unknown
AA seq 603 aa
AEACTSVEMAMQKCPNGILSEIKYDGERVQVHKNGNDFRYFSRSLKAVMPHKVNLFADYI
VQAFPDGDDLILDSEVLMVDNETGKPLPFGTLGIHKKAQFKNANVCLFIFDCLYYNGKIL
IDKSIQERRNILKNRITEIPNRIMLSEVHEVHNLRDLTERIIHILKMDHEGLVLKDINSK
YEPGKRHWLKVKKDYLCGGAMADSADLVVLGAWYGTGNKGGIMSIFLMGCYDEERDKWLT
VTKVHTGHDDSTLTALQDELDMIKIGKDVNKLPNWLLANKSMVPDFIARDPKKQLVWEIT
GAEFTNQGVHTADISIRFPRVTRIRRDKDWSTATTLNELRKLFQKKPDSIDFSLLLKKDF
KDISKKKQSILSTLPKKSENAKRGASSPSEPSTSFAIGEGTFFQNTLDDPESHITEKFAK
KRKRNRYIKNFDSVESTQLKTKKLKFVCGKIEEKTEKDSFTAERNTKESFELSKETSDSD
VEDIDVEDIESNNILQYVRASFAPGFDNTRRKYAHRILQILGGTLVNIPENKSIMTTMTH
IIHTRTEIPSTVVHEDFADFPKTIKHVNMSWLEETSAQFKRQDESLHAIKLVGDYCNCPC
THR
NT seq 1812 nt   +upstreamnt  +downstreamnt
gcagaagcgtgtacgtccgtagaaatggcgatgcaaaaatgtccaaacggaatactatca
gagatcaagtacgacggcgagcgggtgcaagtgcataaaaacggaaacgattttcgatac
tttagtcgatccttgaaagcggttatgccgcataaggtaaatctttttgcggattatata
gtgcaagcttttcccgatggtgatgatctgatcctcgattctgaagttctcatggttgac
aacgagaccgggaaacctttacccttcggcactttggggattcataaaaaagctcaattc
aaaaacgccaatgtgtgtctgtttatttttgactgcttatactacaacggcaagatactt
atcgataaatctatacaagaacgcagaaacatcctgaaaaataggataactgaaataccg
aacagaataatgttatccgaagttcatgaagtacacaatttgcgagatctgacagaaagg
atcatacatatattgaaaatggatcacgaaggtttggttttgaaagacatcaatagcaaa
tacgaacccggtaaaagacattggctgaaggtaaagaaggattatttgtgtggcggcgca
atggctgatagcgcagatctcgtcgtgcttggtgcatggtacggcacaggcaacaaaggt
ggtattatgtccatcttcttaatgggttgctacgatgaagagcgtgataaatggttaacc
gttactaaagttcatacgggacacgatgattccactctaacagctttgcaagacgagctc
gatatgataaagatcggcaaggatgtaaacaaattaccgaattggttgcttgccaacaaa
tctatggtaccagattttatagcaagagatcctaagaaacagctagtttgggaaataaca
ggagctgaatttacgaaccagggagtacacaccgcggatattagtattcgatttccacgc
gtgacgcggattcgccgcgacaaagactggtccacagccaccacactgaacgagttgcgt
aaactctttcaaaaaaagcctgactccatcgatttcagtctcttgctcaaaaaggatttc
aaggacatttcaaaaaagaaacagtccattctcagtacacttccaaagaaatcggagaac
gcgaaaagaggagcaagctcaccaagcgaaccatcgacgagttttgcaatcggagaagga
acattcttccagaatactttagatgatccagagtcgcacattacagaaaaattcgcgaaa
aaacgaaagagaaatagatatataaaaaactttgacagtgtcgaaagtactcagttgaag
acaaaaaaattaaaattcgtgtgtggcaagatagaagagaaaacagaaaaagatagcttt
actgctgaaagaaacacaaaagaatcgtttgaattgtcgaaagaaacttcggattcggac
gtcgaagatattgacgtcgaggatattgaatccaacaacattctgcaatacgtgcgagcg
agttttgcacctgggttcgacaatacaagacggaagtatgcccatagaatacttcaaata
ctcggcggcacgttagtgaacataccggagaacaaatccataatgacgacgatgactcac
atcattcacacacgcacggaaattccatccacggttgtccacgaggatttcgcggacttc
ccgaagaccatcaagcacgtaaacatgtcctggctggaagagacttccgcgcaattcaaa
aggcaagatgaaagtttgcatgctataaaactggtcggtgattattgcaattgtccatgc
acgcatcgataa

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