KEGG   Pseudomyrmex gracilis (graceful twig ant): 109861560
Entry
109861560         CDS       T05003                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc00565  Ether lipid metabolism
pgc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    109861560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgc03036]
    109861560
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgc04147]
    109861560
Chromosome and associated proteins [BR:pgc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109861560
Exosome [BR:pgc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109861560
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EML NBCH_WD40 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_Vps41 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_DCAF4 eIF2A Beta-prop_DCAF12 Beta-prop_SPT8 LisH Beta-prop_IFT140_1st Nucleoporin_N Beta-prop_WDR75_2nd Beta-prop_WDR11_2nd Beta-prop_NUP159_NUP214 Pox_A_type_inc
Other DBs
NCBI-GeneID: 109861560
NCBI-ProteinID: XP_020296846
LinkDB
Position
Unknown
AA seq 410 aa
MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIR
LQKKVMELESKLSEAEKEFIEGAPTRSKRSPAEWIPRPPEKFSLTGHRAPINRVIFHPVF
SLVVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDTSGKLLASCSADMSIKLWDFH
QSFACVKTMHGHDHNVNSVAFVPQGDFVVSASRDKTIKIWEVATGYCVKTFTGHREWVRM
ARVSPCGELIASCSNDQTVRVWHVATKETKVEFREHEHVVECIAWAPESARASINAAAGA
DNKGAHEGPFLASGSRDKTIRVWDVGAGVCLFTLIGHDNWVRCIVFHPGGKFIVSASDDK
TLRVWDTRNKRVMKTLEAHVHFCTSVDFHKNHPYVVTGSVDQTVKIWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgaaaatggtgctgtctcaacgtcagagggaggagttaaataaggcgattgcggattac
cttagcactaatggctatcaagatgcactggaggcatttaagaaggaagcagatatgcca
ggagaagtggagaggaagtacgggggcttacttgagaagaagtggacttcagttatacga
ttgcagaaaaaggtaatggaattagagtctaaactttccgaagcagagaaagaattcata
gaaggcgcaccaacacgtagtaagagatcaccggccgaatggataccgagaccgccggaa
aaatttagcctgacaggacacagagctcctatcaatagagttattttccatccggttttt
agtcttgtagtatctgccagcgaagatgctacaattaaggtgtgggactttgagagtggt
gatttcgaaagaacgctaaagggtcacacggacagtgtgcaagacattgcattcgatact
tcgggcaagttgctcgcgtcttgtagcgcggacatgtctatcaagctgtgggattttcat
cagtcgtttgcttgcgtgaaaactatgcacggccatgatcataacgtcaattcagttgcg
tttgtaccacagggtgattttgtagtgagcgcctctagagacaagaccattaaaatctgg
gaggtagcaacgggctactgtgtaaagactttcacagggcatagagaatgggtgagaatg
gcgcgagttagcccatgcggcgaacttatcgctagttgctcaaacgatcagactgttcga
gtatggcacgtggcaacgaaagagacaaaggtcgaattcagagaacatgaacacgtggta
gaatgtattgcatgggcgcccgaaagcgcaagagcttcgatcaatgcagcggctggagct
gacaataaaggtgcacatgagggacctttcctcgcatccggatcgcgagacaagacaatt
cgcgtgtgggatgttggtgccggagtgtgtcttttcactcttatcgggcacgacaattgg
gtgcgatgtattgtcttccatcctggcggcaagtttattgttagcgcgtctgacgataag
acgctgcgagtctgggacacgcgcaacaaacgagtgatgaagactctcgaagcgcacgtt
cacttttgcacttctgtcgattttcacaaaaatcatccttatgtcgtcaccgggagcgtc
gatcaaacggtgaagatttgggagtgtcgctag

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