Pseudomyrmex gracilis (graceful twig ant): 109861670
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Entry
109861670 CDS
T05003
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109861670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109861670
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109861670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
ZnuA
Motif
Other DBs
NCBI-GeneID:
109861670
NCBI-ProteinID:
XP_020296995
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSFGSGFGTSTSTPAPTFAFGTTPASTATPVKPVAGFGTPSFGFSTPTTSTPSLFGTPST
QTTGFSTGFGTPAATGFGSTSTTGFGSAPTFGTASSSAFGAAPAFGNTTSSTSTGFGTTS
TFGSAPTSATGFGGFGTATTTSSLSFGSFGGFGTTTTTSAPSLFSGFGTTNTVSSGFGTS
TGFGAFGTKPATTTATGFGGFGTGTGFTGFGTGLTQPQQQPQQQSQQQQQLGNSGSEALY
NAVFNCLLYNDERDNTIARWNLIQALWGTGKAYYSVNAPPIELTQENSLCRFKAIGYSRI
PDADNNDGLVVLCFNKKEKDVQDGKQQLIVFLNGLLGNKPNLTVTVDNIKSTGENKSQVT
IYVSEKGITGSYRKIPANELVAYLSQAMQKQQLMQNGVEDIFPLVKLDQSQLKEYLDNPP
CAIDARLWKQAQLDNPNPELYIPVPMIGFQQVKHRLKCQEEETARYRAFLDMAAEKIQGL
QRQHTATQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFEAMHSQI
SAPTQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKAYLSMQQQGMAQLIATIN
ADLESLKIIKDGMSDLLINHAQSVS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcagcggcttcggaacgtctacatcgacacccgcacccacgttcgctttc
ggcaccacacccgcttccacggcgactccggtcaaacctgtagcaggatttggaacacct
tcgttcggatttagtacaccgactacttcaacgccgagtttgtttggtacaccgtccact
caaactactggatttagtaccggatttggtactccagcagctacaggatttggtagcaca
tcgaccacaggttttggatctgcacctacattcggtaccgcgtcatctagcgccttcggt
gcggcgccagcttttggcaatactacttcttccacaagcacaggattcggtacaacttcg
acttttggcagtgctcccacttccgcaaccggttttggtggatttggaacagcgacaaca
acatcgtcgttaagtttcggaagttttggtggatttggaacaactactaccacatctgct
cccagtctgtttagtggatttggtaccacaaatactgtttcgagtggttttggcacatcc
acaggttttggcgcctttggaaccaagccagctaccactactgccactggatttggtgga
tttgggacaggaactggatttaccggatttggcaccggattgacacagcctcaacaacag
cctcagcaacagtctcaacaacagcaacaacttggaaatagtggatcagaagctctatat
aatgcagtgttcaactgtctattgtataacgatgagcgagataacactattgcaaggtgg
aatcttattcaagcattgtggggcacgggaaaggcttattattctgtaaatgctccacca
atagagctcactcaagaaaactcattgtgcagatttaaagctattgggtacagccgtata
cccgacgcagacaacaacgacggtttagtggtattgtgcttcaataagaaagagaaagat
gtgcaggatggcaaacaacaattaatcgtgtttctgaatggtttgctgggaaacaagccg
aatttaacagtaaccgttgataatattaaatccacaggagaaaataagagtcaagtaacg
atatacgtgtcagagaaaggaattaccggttcttacagaaaaattcctgcgaatgaattg
gtagcttatctatcccaggctatgcaaaagcaacaattgatgcaaaacggtgtggaagat
atatttccactggtaaaactcgatcagtcgcaattaaaagagtatttggataatccgccc
tgtgctatcgacgctagattatggaaacaagcacaattggacaatcccaatccggaatta
tatataccagttcccatgattggttttcagcaagtgaaacatagattgaagtgtcaagag
gaagaaactgctagatatagagcgtttttagacatggcagctgaaaagatacaaggcttg
cagagacagcatacagctacacaggccagactcaaggaacacaggcgtacactgttggaa
cttcaacacagagtcttacaggtgctagttcgacaagagatcacacgtaaggtcggattg
tctctgcaaccagaagaagaagttctgacgcgtagatttgaagcaatgcattcgcaaatc
agtgctccgacgcaatacaaaggtagaattagcgaaatgctttcgcagcttcgaatgaga
cggcacatcgatattcaaaatcaagaaagatatacaatggatcctatagcacaggatgat
atcaaagcgtatttaagcatgcagcagcaaggaatggcgcagcttattgcaacaataaat
gctgatttagaaagcctgaaaataataaaagacggaatgtcggatcttttaataaatcat
gcacaaagtgtatcttaa
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