Pseudomyrmex gracilis (graceful twig ant): 109861965
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Entry
109861965 CDS
T05003
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109861965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109861965
Membrane trafficking [BR:
pgc04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109861965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_VPS8
PAC11
DSE1_N
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR72_alpha-sol
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_NOL10_N
NBCH_WD40
TRM82_WD
BBS2_CtH
VID27
Motif
Other DBs
NCBI-GeneID:
109861965
NCBI-ProteinID:
XP_020297413
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MTAGTSLVVPIVLWGRIAPTHCISCVYLSRDQKTLVTGCYDGQICLWQVDPETLKMTPRC
LLVGHTAPIMCLSRASVVMEQNFIVSSSESGEMCTWDLVDGKCREAVKLNNIHTQMLPYV
SASGEDVKLFCSGYYPEVLVMDPFSLEVLFTLSSRVNPDWISALHVLRPAKRKGRFYVHT
NDVVLALTTTGTVKVWTLLGHENRNSEPLYEHESKQIRCLNALAMTCCPYNQRTVLIVCS
KYWQIFDAGDFSVLCSITVPRGERWMAGDFLAADRVILWSDEGHGYLYKLPAKVLPEFDS
KLKGKALSSSVADNKNFHTASTEQDQPYLYCTLTQPGDKPLSCPPAMRLVTVQRQNKTLK
YLLRGDSEGVVILWTVPDVTTQQLAQICQNDGSSPPALPPTVKTSLTAAWDAMKPPPVGI
LDQLDSGDGQGIKLTACIYLPQQSRLVVGREDGSIIIVPATQTVMLQLLHGNHQQYDDWP
PHQVLLGHSGRVNCLLYPHGAASRYDRTHLVSGAVDFAVCLWDLYAGTLIHRFCVHAGEI
TQLMVPPDNCSPRIQKCVCSVASDHSVTLLSLAERKCVVLASRHLFPVVTIKWRPLDDFM
IVGCSDGAVYVWQMETGHLDRVLHGIIAEEVLYACDENTIAAACGSAGGGELGLANPAVH
FFRGLRHRNLSAIRHATQRGLHQLQQLHGGHGPDHGNQIKAKGSPLMIQGFRSNPKDPES
HILFFDIEALIVQLLSDEYGSMSPGSLEAQGLISAAEYQKVAALTQSASPDAHKKIVDFF
GRVKDKAGDVERILKEKDRHGILAKMKEGAENVHTKLQAKAESVGLKPSNVDGKGENWNN
TDATKNNLKRNGVFSEPNTTMEIAQLLLSLLHAWGMDPDLDRVCEGKLGLLRPMVPVSFG
VLSKGGYMSLLLPTWQTQLEPIGEPATQLEQRLPAELVRQERLTRAFTARAHWELSTTLT
SNHLLAVVALANTLMSMNNATFVPEQERNRKLHRPGNRGAVNWNKTEEENEEMYTVQQAQ
IKQGWSLLATLHCVLLPDKVAAQGGAKTFKRPQVEMMARRWQHQCVEIREAAQALLLAEL
GRMGTKGRKALVDNWSQYLPMYSTQEPIAPQAQNQNSPAPGSPVPSAESQPEEEYEEEEL
AEAESIARKPSSVAELKRKQTTAVVLLGVIGAEFGQDVATSNQKRDNEQRRKSSIVEGFG
IGNNNLARHTSMALTHLLHAPHSPKLPMHTALRRAAIDLIGRGFTVWEPYLDVSKVLLGL
LEMCCDADKLVPSLTYGLPLTPQADTCRTARHALTLIATARPAAFITTMAREVARFNTLQ
QNAQTLNVNLGASVLTRAKPEILRIVEQLIDKMQSEMSDLLVEVMDIILHCLDPGHLKMK
PLNEVFPAVCRFNQVSHCPATRRIAVGGRNGQLALYELRGNVKCQTVPAHSAPVTALAFS
PEGKFLVSYSCSENKLCFWQQTSSGMFGLGNSQTRCVKSYSTAPINDVARLNPMRLARLI
WINNRTVTLMLADGSETRFNV
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgggtaccagtttggtagtacctatagtgttatggggacggatagcaccaact
cattgtatttcttgtgtctatttatctcgagatcaaaagacattggtcacaggatgttac
gacgggcaaatatgtctgtggcaagtggatccagaaacattgaagatgactccaagatgt
ctgcttgttggacacacagctccaataatgtgtctcagccgagctagcgttgtaatggaa
caaaatttcattgtcagcagcagcgagagtggtgagatgtgcacttgggatctggtcgat
ggcaagtgtcgcgaagctgtgaaactcaacaacatccacacacagatgttaccttatgtt
tccgcgagcggagaagatgttaaattgttttgctccggatattatcctgaggttctggta
atggatccctttagtctggaagtgctgttcaccttgagctctcgtgtaaatccggattgg
attagcgctttgcacgttttgcggccggccaaacggaaaggtcggttctacgtgcataca
aacgacgtcgtgctggctttaacgacgacaggcacggtcaaagtatggacactcctggga
catgagaatcggaacagcgaacctttatacgaacacgagagtaagcagatacgctgcttg
aatgcgctcgcgatgacctgctgtccttataatcaaagaacggtactcatagtgtgctct
aaatattggcagatattcgatgccggtgatttttcggttctctgctcgataacagtacca
cgtggcgaacgttggatggcgggtgatttcttggctgccgatagagtcattttgtggagc
gacgagggtcacggatatctatacaagcttccagcaaaggttctgccagaatttgacagc
aagctgaagggcaaggctctcagcagtagcgtcgcggataacaagaactttcataccgcc
agtaccgagcaagatcagccctatctgtattgcacactaacccaacccggagacaagcct
ctttcttgccctccggctatgcgactggtcactgtgcaacgtcaaaacaagactctaaag
tatttgttgcgcggtgatagcgagggtgttgttatcctctggacagtgccagatgtgacg
acgcagcaactcgcccagatatgtcagaacgacgggtcttctccgcccgcgttaccgccg
actgtaaaaacgagtcttaccgctgcctgggacgcgatgaaaccaccacccgtgggaata
ctcgatcagttggactcaggcgacggtcagggtattaaactcaccgcttgcatttactta
ccgcagcagagtcggctagtcgttggtcgcgaagacggtagtatcatcattgttccagcg
acgcaaactgtgatgcttcaattgctgcatggcaatcatcagcagtacgatgattggcca
ccacatcaagttcttctgggtcactcaggacgagtaaactgtctgctttatccacacggc
gcggcatctcgctacgatcgcactcatctcgtttccggtgctgtggatttcgctgtttgt
ctctgggatttatacgctggcacattgatccaccggttttgcgttcacgccggcgaaatc
acacaactaatggtgccgcctgataattgcagtcctagaatacaaaagtgcgtttgcagt
gtggcgtcagatcacagtgtcacattgctctcattagctgagagaaaatgtgtcgtgctt
gcttcgcgtcatcttttcccggtggtaaccatcaagtggagaccattggatgatttcatg
atagttggatgttcggacggtgctgtgtacgtttggcaaatggaaaccggtcatttggat
cgcgtattgcacggcattattgcggaagaggtgctctacgcatgtgatgaaaacactata
gctgcggcatgcggatctgctggcggcggtgaattaggactagccaatcctgctgtgcat
ttttttaggggtttacgccataggaatttatcggcaattcgacacgccacacagagaggg
ctgcatcagttacagcagcttcacggcggacatggtcccgatcatggtaatcaaataaaa
gccaaaggctcgccgttaatgattcagggattcaggagtaacccgaaggatccggagagt
catatcttgtttttcgacatagaagcgttaatagtacaattgctcagtgacgagtacggt
tccatgtcgcctggctccttggaagcgcaaggacttatttctgccgctgaatatcaaaaa
gttgcagcgctcactcagtctgccagtcccgatgctcacaagaaaatagttgactttttc
ggtcgcgtcaaggataaggcaggcgatgttgaacgaatattgaaggagaaggatcgtcac
ggtatattggctaagatgaaggaaggtgcggagaatgtgcatactaaattacaggccaaa
gcagaaagcgtcggtctcaagccgtcgaatgtcgacggcaaaggagaaaattggaataac
accgatgcgacgaaaaacaatttgaaacggaatggtgtgttcagcgaaccgaatacaaca
atggagatagcacagctacttttgagtcttttacacgcctggggtatggacccagacttg
gatcgagtttgcgaaggaaagttgggactactacggcctatggttcccgtttctttcgga
gtactatctaagggaggctacatgtcattgctgttgccaacttggcaaacacaacttgag
ccgatcggcgaacctgcgacacaattggagcaacgcctaccggcggaattggtcaggcaa
gagaggctcactagagcgttcacagcgagagcgcactgggaactgtcgacgactctgacg
agcaatcatttactcgcggtggtcgctttagcaaataccttaatgtcgatgaataacgca
acgtttgtacctgagcaagaacgaaatcgcaaattgcatagaccgggtaatagaggtgca
gtaaactggaacaagacagaagaagaaaacgaagaaatgtacacagtgcagcaagcacaa
attaaacagggttggtcacttttagcgacattgcattgcgtattattacctgataaagtt
gcggcgcagggcggtgcaaaaacattcaagcggccgcaagtagaaatgatggcacgaaga
tggcaacatcagtgcgttgagattcgagaagcagcgcaagctttattactcgccgaatta
ggcagaatgggcacgaaaggacgcaaagcgcttgttgacaactggtcacagtatttaccg
atgtacagcactcaggaacctattgcgccgcaagcgcaaaatcaaaattcgccagcaccc
ggaagcccagtgccatctgcagaatcgcaaccagaagaagaatacgaagaagaggaatta
gctgaagcagaaagtatagctagaaagccatcaagtgtagcagaattgaaacgaaagcag
accacggcggtcgtattattgggcgtgataggggctgaatttggccaagatgtggctaca
agcaatcaaaaaagggacaacgaacaaagacggaagagctcgatcgtggaaggttttggc
ataggaaataacaatcttgctagacacactagcatggcactcactcatttgttgcacgca
cctcattctcctaagctaccgatgcacacggcgctacgaagagccgcgatcgatcttatt
ggcaggggattcaccgtgtgggaaccttatctcgatgtatcaaaggttttattaggccta
ttggaaatgtgctgcgacgcggacaagttagtgccgagtcttacatacggccttcctctt
acaccacaagctgacacatgtcgcacagcgcgtcacgccttgacgttaatcgccaccgct
agaccagctgcttttatcactacaatggctcgcgaagtagccaggttcaacactcttcaa
caaaatgctcagactttgaacgtcaatcttggcgcgagtgttctaaccagagcaaagcca
gagattctcaggattgttgagcaattaatcgacaagatgcaaagcgaaatgagcgatcta
cttgtagaggtcatggacatcatcttacattgcttagatccaggtcatttaaaaatgaag
cccttgaacgaagtatttccggcagtgtgtagattcaatcaggtcagtcattgtccagca
acgcgcaggatagcagttggtggtcgcaatgggcagctcgcattgtatgaattgcgaggc
aatgtcaaatgccaaaccgttcctgcccactcggcaccggtcactgcattagcgttctca
ccggaagggaagttcctcgttagttattcttgttccgagaacaagctctgtttttggcag
caaaccagcagcggtatgttcggtctgggtaactcacagactcgctgcgtgaaatcttac
agcaccgcgccaatcaacgacgtagcccggttgaacccgatgcgcttagctcgtctaatt
tggattaacaatcgcacagttaccctaatgctcgccgacggctcggagacacgtttcaat
gtttga
DBGET
integrated database retrieval system
